- Transcript 'KH2012:KH.S654.2.v2....'
Transcript Model
Transcript Id
KH2012:KH.S654.2.v2.R.nonSL1-1
Possible name(s)
TBX2; TBX3; TBX6
Gene model
Location
KhS654 [30,754 / 31,939]
Amino acid sequence
Length: 286
>KH.S654.2.v2.R.nonSL1-1
GHQWMKEIISFHKVKLTNSCGNSADGKFLIHSMHRYQPRIHIVRTDDVNTLHLQPMSTFA
FPQTAFVTVTAYQNGQITKLKIANNPFARGFREDGAKTKKRKSQVSTFTDQQVLTKNNQR
YSPEATTSNLEKRMKFENVLSGEHVHLQPTAWYQSTNHFLPADCKQSYSTSQQTVHPQNH
NGSPPPPYAFQYSDVSPCNNRYDFSVANNPIHPQNIQYYDQQPPFDPVFPSHNNYVYHHK
VMSNPINSSEVNSISYFTSPQNSPDDVHLENTQFCYNNFQYIDSFA
Nucleotide sequence
Length: 957
>KH2012:KH.S654.2.v2.R.nonSL1-1
GGGCATCAATGGATGAAAGAAATCATTTCGTTTCATAAAGTGAAACTCACAAACTCTTGT
GGAAACTCAGCTGATGGAAAGTTCCTCATACACTCCATGCATCGGTATCAACCTCGTATC
CACATCGTTCGTACTGATGACGTCAATACTCTGCATCTACAACCGATGTCAACTTTCGCT
TTTCCACAAACTGCTTTCGTCACAGTCACGGCCTACCAAAACGGACAGATCACTAAACTG
AAAATTGCAAACAATCCGTTTGCACGAGGTTTCCGTGAAGACGGTGCTAAAACAAAGAAG
AGAAAATCACAAGTTTCAACATTTACGGATCAACAAGTCCTTACTAAAAATAATCAGAGA
TATTCCCCCGAAGCAACAACATCGAATTTGGAAAAAAGAATGAAGTTCGAAAATGTATTG
AGTGGTGAACATGTTCACCTACAACCAACGGCATGGTACCAGAGCACAAATCACTTCCTA
CCCGCTGATTGTAAACAAAGTTATTCTACTTCACAACAAACTGTACATCCTCAGAATCAT
AATGGGTCACCACCACCACCATATGCATTCCAATATTCTGACGTCAGTCCTTGCAATAAT
CGCTACGACTTCTCGGTCGCAAACAATCCAATTCATCCACAGAATATTCAGTATTACGAC
CAACAACCACCATTTGATCCGGTATTTCCCTCCCATAACAATTATGTTTACCACCACAAA
GTGATGTCCAATCCCATTAATTCATCTGAAGTTAATTCAATAAGTTATTTCACTTCGCCA
CAAAATTCACCTGATGATGTCCATCTGGAAAACACCCAATTTTGTTATAACAATTTTCAA
TACATTGACAGTTTTGCTTAAATACAAATTTGAAAGTTCCTTTTAATACTTTTTTGTTAT
TGTTCGAAAAATGCGTTTTTGTCACTGTTAGTAATTGTGTCCTATAGTTGAATAAAA
| ProSiteProfiles |
TF_T-box (IPR001699) - T[1-93] 37.789 |
| Gene3D |
T-box_sf (IPR036960) - T[1-101] 2.4E-38 |
| PANTHER |
TF_T-box (IPR001699) - T[1-127] 5.3E-52 - T[127-249] 5.3E-52 |
| Pfam |
TF_T-box (IPR001699) - T[1-93] 3.6E-35 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[1-95] 4.6E-32 |
| SMART |
TF_T-box (IPR001699) - T[1-98] 1.8E-8 |
| PRINTS |
TF_T-box (IPR001699) - T[9-18] 1.7E-19 - T[29-43] 1.7E-19 - T[64-77] 1.7E-19 - T[85-93] 1.7E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 53.922 % | 123 | 3.06E-32 |
| TBX2_HUMAN | 48.113 % | 113 | 2.85E-28 |
| TBX3_HUMAN | 39.189 % | 110 | 4.18E-27 |