Aniseed - Transcript Card

Transcript 'KH2012:KH.S654.4.v1....'

Transcript Model

Transcript Id

KH2012:KH.S654.4.v1.A.ND1-1

Possible name(s)

CYB5D2; NENF; PGRMC1

Gene model

KH2012:KH.S654.4

Location

KhS654 [21,525 / 24,366]

Sequences

Amino acid sequence

Length: 321

>KH.S654.4.v1.A.ND1-1
VLSLYATSYVELLLIQTHVMGCLRLSFIVIVLAVGAGLYFRSTEDARVKEILNTVLKLTP
KPIVDLFQSARDDSHNAKKQEKVTDNEVKSTNRIFSKQDLWDNYRGGDESKGLYLAFFGK
VFDVSKGKEHYGPGGGYHFFAGRDGTKGFVTGDFSDEGLTDDIEGMDSKLMIGFDDWIQF
YSSSYTYVGTVIGQFYDENGEPTEALKNANKLIAEAKQAKKQEDEENKILPMCNSESSAA
KGSRVWCSTKSGGVERNWVGVPRQYHPPGATSPRCACVRTAGKPSYGTDDGKNRGDLDNP
YLREYNGCHSTSDSCVIKQPK

Nucleotide sequence

Length: 1,728

>KH2012:KH.S654.4.v1.A.ND1-1
GGCTCTCTTGTACATCTGTAGCTGAACTTTCTTGGCTTCTTGCCCGTTAACTTTCTCTGT
GTATAAGATAATAGATATCTATGCTGATGTATATTTGACGATCAACCGAACCTACTACTA
CCTATTACCTAAGTACTTTCGCTGTACGCTACGTCGTACGTTGAATTACTTTTAATTCAA
ACTCACGTGATGGGTTGTTTGCGTTTATCTTTTATTGTTATTGTTCTGGCTGTCGGCGCT
GGTTTGTACTTTCGTTCTACCGAAGACGCCCGTGTTAAAGAAATACTAAACACGGTTTTA
AAACTTACACCAAAGCCGATTGTGGATTTATTTCAATCGGCACGGGATGACAGTCATAAC
GCGAAAAAACAAGAAAAAGTAACTGACAATGAAGTTAAAAGTACAAACCGCATTTTTTCG
AAGCAAGACTTGTGGGATAATTATCGGGGTGGGGATGAAAGCAAAGGTTTATACCTCGCT
TTTTTCGGCAAAGTCTTTGATGTAAGTAAGGGGAAAGAGCATTATGGACCTGGTGGTGGT
TACCACTTCTTTGCAGGTCGTGATGGAACCAAAGGTTTTGTGACGGGAGATTTTTCTGAT
GAAGGTTTAACAGATGATATTGAAGGAATGGATTCAAAGTTAATGATTGGATTTGATGAT
TGGATTCAGTTTTATTCTTCTTCTTATACATATGTTGGAACTGTAATTGGTCAATTTTAT
GATGAGAATGGTGAACCAACTGAAGCACTGAAAAACGCTAACAAGCTGATTGCTGAAGCA
AAACAAGCTAAAAAGCAAGAAGATGAGGAAAATAAAATCCTACCAATGTGTAACTCTGAA
TCATCAGCTGCAAAAGGTTCCAGGGTTTGGTGTTCAACAAAAAGTGGTGGTGTGGAAAGA
AACTGGGTTGGAGTTCCACGACAATATCATCCACCAGGTGCAACTTCCCCTCGTTGTGCT
TGTGTAAGGACAGCTGGTAAACCTTCTTATGGAACAGATGATGGTAAAAATCGAGGGGAT
CTTGACAACCCATATCTACGCGAGTATAATGGCTGTCATTCAACATCAGACTCTTGTGTG
ATTAAGCAACCTAAATAATTTAAAAACGTACTACTACTATCTATAGGCAATTATTATGAT
CAAAAATGAACTCTATAGCCCGTTAATAAAGTATGCTAATGTTGTCAATTACCAACATTT
ATAAAAGGGACGTTTTGTTTAGCATTTTTTTTAGTGTATAGTAATACAGTATACTCTGCG
CAAAATATATTCTTATTAAGACACAATAATGTACTCGTCGAGTTATTTTAAAATTCATAA
ATACACTATTTTTTTGCTTTGCATATATGAGTTTGAAGCATCAAGTAAATTTATTATTTT
TCTATATATCGTCTAATTTATTTTTTAACTTGCTTTAATTCTGTCTTCCTTTTTGTACAA
AATAATTTTGTTATTAATTTCGATCAAATATATATTGCCTTTTATTTGTGTTTAAGCAAC
AGAATCACCAAGTCTTCCAATGACCTTGTTGCATTGTATATAGGTAACATTATTGTAAAT
ATTTTGCTGCTTTATAAAGCAGGTTATAGCCTCCCTACTACACCATTTTCTTAGAACCTA
CTGAAAGTCTGTAAATGCGTTTTTGTTAATCTAATTAGTTGCTGGTTTAAATTGACTTAT
GTGAACATTTATTTTCAAAAAATGGATAGATACACAATTTACGAAATA

InterProScan

Gene3D	Cyt_B5-like_heme/steroid_sf (IPR036400) - T[91-193] 2.7E-28
SMART	Cyt_B5-like_heme/steroid-bd (IPR001199) - T[95-192] 1.0E-17
SUPERFAMILY	Cyt_B5-like_heme/steroid_sf (IPR036400) - T[103-192] 9.95E-22
Pfam	Cyt_B5-like_heme/steroid-bd (IPR001199) - T[108-159] 4.2E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NEUFC_HUMAN	48.23 %	230	1.33E-74