Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.S654.4.v1.A.nonSL5-1

Possible name(s)

CYB5D2; NENF; PGRMC1

Gene model

KH2012:KH.S654.4

Location

KhS654 [21,525 / 24,290]

Sequences

Amino acid sequence

Length: 321

>KH.S654.4.v1.A.nonSL5-1
VLSLYATSYVELLLIQTHVMGCLRLSFIVIVLAVGAGLYFRSTEDARVKEILNTVLKLTP
KPIVDLFQSARDDSHNAKKQEKVTDNEVKSTNRIFSKQDLWDNYRGGDESKGLYLAFFGK
VFDVSKGKEHYGPGGGYHFFAGRDGTKGFVTGDFSDEGLTDDIEGMDSKLMIGFDDWIQF
YSSSYTYVGTVIGQFYDENGEPTEALKNANKLIAEAKQAKKQEDEENKILPMCNSESSAA
KGSRVWCSTKSGGVERNWVGVPRQYHPPGATSPRCACVRTAGKPSYGTDDGKNRGDLDNP
YLREYNGCHSTSDSCVIKQPK

Nucleotide sequence

Length: 1,652

>KH2012:KH.S654.4.v1.A.nonSL5-1
ATCTATGCTGATGTATATTTGACGATCAACCGAACCTACTACTACCTATTACCTAAGTAC
TTTCGCTGTACGCTACGTCGTACGTTGAATTACTTTTAATTCAAACTCACGTGATGGGTT
GTTTGCGTTTATCTTTTATTGTTATTGTTCTGGCTGTCGGCGCTGGTTTGTACTTTCGTT
CTACCGAAGACGCCCGTGTTAAAGAAATACTAAACACGGTTTTAAAACTTACACCAAAGC
CGATTGTGGATTTATTTCAATCGGCACGGGATGACAGTCATAACGCGAAAAAACAAGAAA
AAGTAACTGACAATGAAGTTAAAAGTACAAACCGCATTTTTTCGAAGCAAGACTTGTGGG
ATAATTATCGGGGTGGGGATGAAAGCAAAGGTTTATACCTCGCTTTTTTCGGCAAAGTCT
TTGATGTAAGTAAGGGGAAAGAGCATTATGGACCTGGTGGTGGTTACCACTTCTTTGCAG
GTCGTGATGGAACCAAAGGTTTTGTGACGGGAGATTTTTCTGATGAAGGTTTAACAGATG
ATATTGAAGGAATGGATTCAAAGTTAATGATTGGATTTGATGATTGGATTCAGTTTTATT
CTTCTTCTTATACATATGTTGGAACTGTAATTGGTCAATTTTATGATGAGAATGGTGAAC
CAACTGAAGCACTGAAAAACGCTAACAAGCTGATTGCTGAAGCAAAACAAGCTAAAAAGC
AAGAAGATGAGGAAAATAAAATCCTACCAATGTGTAACTCTGAATCATCAGCTGCAAAAG
GTTCCAGGGTTTGGTGTTCAACAAAAAGTGGTGGTGTGGAAAGAAACTGGGTTGGAGTTC
CACGACAATATCATCCACCAGGTGCAACTTCCCCTCGTTGTGCTTGTGTAAGGACAGCTG
GTAAACCTTCTTATGGAACAGATGATGGTAAAAATCGAGGGGATCTTGACAACCCATATC
TACGCGAGTATAATGGCTGTCATTCAACATCAGACTCTTGTGTGATTAAGCAACCTAAAT
AATTTAAAAACGTACTACTACTATCTATAGGCAATTATTATGATCAAAAATGAACTCTAT
AGCCCGTTAATAAAGTATGCTAATGTTGTCAATTACCAACATTTATAAAAGGGACGTTTT
GTTTAGCATTTTTTTTAGTGTATAGTAATACAGTATACTCTGCGCAAAATATATTCTTAT
TAAGACACAATAATGTACTCGTCGAGTTATTTTAAAATTCATAAATACACTATTTTTTTG
CTTTGCATATATGAGTTTGAAGCATCAAGTAAATTTATTATTTTTCTATATATCGTCTAA
TTTATTTTTTAACTTGCTTTAATTCTGTCTTCCTTTTTGTACAAAATAATTTTGTTATTA
ATTTCGATCAAATATATATTGCCTTTTATTTGTGTTTAAGCAACAGAATCACCAAGTCTT
CCAATGACCTTGTTGCATTGTATATAGGTAACATTATTGTAAATATTTTGCTGCTTTATA
AAGCAGGTTATAGCCTCCCTACTACACCATTTTCTTAGAACCTACTGAAAGTCTGTAAAT
GCGTTTTTGTTAATCTAATTAGTTGCTGGTTTAAATTGACTTATGTGAACATTTATTTTC
AAAAAATGGATAGATACACAATTTACGAAATA

InterProScan

Gene3D	Cyt_B5-like_heme/steroid_sf (IPR036400) - T[91-193] 2.7E-28
SMART	Cyt_B5-like_heme/steroid-bd (IPR001199) - T[95-192] 1.0E-17
SUPERFAMILY	Cyt_B5-like_heme/steroid_sf (IPR036400) - T[103-192] 9.95E-22
Pfam	Cyt_B5-like_heme/steroid-bd (IPR001199) - T[108-159] 4.2E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NEUFC_HUMAN	48.23 %	230	1.33E-74