Aniseed - Transcript Card

Transcript 'KH2012:KH.S761.6.v1....'

Transcript Model

Transcript Id

KH2012:KH.S761.6.v1.A.ND1-1

Possible name(s)

CSAD; GAD1; GAD2

Gene model

KH2012:KH.S761.6

Location

KhS761 [3,917 / 7,333]

Sequences

Amino acid sequence

Length: 538

>KH.S761.6.v1.A.ND1-1
QCILFAKMQKQSAWRFRSSSVGLIKVEPNNDDYSMNNGDFENSSSADLLPFGKSDEKTQL
FLKEIFEILLKYISKSFDRKCKILDFHHPHQLLEGIEGFSLNINGEAESLEQILVDCRDT
LKYGVKTGHPRFFNQLSSGLDIVSLAADWVTSTANTNMFTFEIAPVFILMEDVIIKRMMK
IIGWENIDGIFSPGGSINNLYSVMLARHKIMPDVKHSGLRGFPQLVMFQSKHAHYSNKRP
AAILGIGLNNCIDIEVDERGHMKPEDLELKILQSKLDGKVPFYVTATAGTTVRGAFDEIV
KISEVCKKYKIWLHVDAAWGGAVMMSQKHRHLVAGIEMSDSVTWNPHKMVGVVLQCSMFL
TKHKRLLESCNNMRADYLFQQDKHYDITYDTGDKTIQCGRHVDVFKLWLSWRAKGDKGFC
HHVERCIELARYLVRKIKKTPGFQLVFQEPEYSNVCFWYYPPSIRNICDEVIKNEKLGKV
APIIKSRMMERGSIMIGYQPLGSKVNFFRCVISNCAVNYDDIDFMVGEIERLGHDIDM

Nucleotide sequence

Length: 2,175

>KH2012:KH.S761.6.v1.A.ND1-1
CGTAAATGTCATGGCAACATAGATGTTTAAACATGTGTTTATTATTAAGATATCTATGTT
GAAACCGCTACCATATTTCGCACTGACAATTGATTGTTACGTCATAAACGTGATTGATGA
TTCTAGTTAGCGATTGTCTTTAAAACAATCGATAATAATGGAAGATTATTTATTAGCTAA
TGGGTACTTTGACGTAACAGAACTACTGGTAAAGAGCTATTGTTGATTTTAGAATTGTAT
TTTTTGTCATTTAAATGAATAATTTATTGGCACGCGGCAAAATCCAAATGAATATGTTCC
CATGAGAGGCGGTATTTATTATTCGGACATGGATTCGCAATTAACCCACAATGCGACTAA
TTCATGCGTAATAAAGCTTGTCTTAGCGGAAAATTGCCTTTTTTCTGCCTCCTCTATATA
AGATGATATACGTAACAATGCATATTATTCGCGAAGATGCAGAAACAATCGGCTTGGAGG
TTCCGAAGTTCGAGTGTCGGGCTTATTAAAGTTGAACCAAACAATGATGATTATTCCATG
AACAATGGAGATTTTGAAAACTCTTCTTCGGCAGATTTACTTCCTTTTGGAAAATCTGAT
GAAAAAACTCAACTTTTCTTAAAAGAAATTTTCGAAATACTTTTAAAATATATTTCGAAA
AGTTTTGACCGAAAATGTAAGATTCTTGATTTTCACCATCCACATCAGTTGTTGGAGGGG
ATTGAAGGATTTTCATTGAATATAAATGGTGAAGCCGAGTCATTGGAACAAATACTGGTG
GATTGTAGAGACACTTTAAAGTATGGGGTTAAAACTGGCCACCCTCGATTTTTCAACCAA
CTAAGCAGCGGACTTGACATTGTTTCGCTCGCTGCTGATTGGGTGACGTCGACGGCTAAC
ACTAATATGTTCACATTTGAAATAGCTCCTGTGTTTATTTTAATGGAAGACGTGATTATT
AAACGCATGATGAAAATAATTGGATGGGAAAACATAGACGGAATATTTTCACCAGGTGGT
TCAATCAACAATCTATATTCTGTGATGTTGGCACGCCATAAAATAATGCCGGATGTCAAA
CATAGCGGCTTGCGAGGATTTCCACAATTAGTCATGTTTCAATCTAAGCATGCACATTAT
TCCAACAAACGACCAGCAGCGATTCTCGGGATTGGTTTGAACAATTGTATCGACATTGAA
GTAGATGAAAGAGGGCATATGAAACCAGAAGATCTTGAATTAAAGATCCTCCAATCAAAG
TTGGATGGTAAAGTTCCTTTTTATGTAACGGCCACGGCGGGAACCACTGTTCGAGGAGCT
TTTGATGAAATTGTAAAAATATCAGAAGTTTGTAAGAAATATAAGATCTGGCTTCATGTG
GATGCTGCCTGGGGAGGAGCAGTTATGATGTCACAGAAACATCGACACCTAGTGGCAGGA
ATTGAAATGTCGGATTCGGTGACGTGGAACCCCCATAAGATGGTTGGGGTCGTCTTGCAA
TGTTCGATGTTTTTGACAAAACATAAGAGGCTTCTAGAATCCTGTAACAACATGCGAGCT
GATTATTTGTTTCAACAAGATAAGCATTATGACATCACATATGATACTGGTGACAAAACA
ATCCAATGTGGTCGACATGTTGACGTTTTTAAATTATGGTTGTCATGGAGAGCAAAGGGA
GACAAAGGGTTTTGTCATCATGTTGAAAGATGCATAGAGCTTGCAAGATATTTGGTTCGA
AAAATCAAGAAAACTCCAGGATTTCAACTTGTGTTCCAGGAGCCGGAATATTCGAACGTA
TGTTTCTGGTATTACCCTCCATCTATTCGAAATATTTGCGACGAAGTGATCAAAAATGAA
AAACTTGGAAAAGTAGCCCCGATAATTAAATCCCGAATGATGGAACGAGGCTCGATTATG
ATTGGCTATCAACCCTTGGGGTCAAAGGTCAACTTCTTCCGGTGTGTCATTAGCAATTGC
GCTGTTAATTACGATGACATTGATTTTATGGTGGGCGAGATTGAACGACTCGGACACGAC
ATTGATATGTAACAATGTTCTTTGTTTGTTCTTTATTTATTTGTTACGTAACAATCAACA
TCACTGTGGAGTTTATTATTACACCATAATCGTTGTAAATTAAATCTACGAAGTGGATTG
CGCAATCCATCCAGC

InterProScan

SUPERFAMILY	PyrdxlP-dep_Trfase (IPR015424) - T[56-534] 1.07E-121
Pfam	PyrdxlP-dep_de-COase (IPR002129) - T[98-459] 1.8E-119
Gene3D	PyrdxlP-dep_Trfase_major (IPR015421) - T[157-403] 1.6E-198
ProSitePatterns	Pyridoxal-P_BS (IPR021115) - T[341-362] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CSAD_HUMAN	47.984 %	510	3.63E-178
DCE2_HUMAN	57.172 %	624	0
DCE1_HUMAN	58.868 %	667	0