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  1. Clone 'cibd015j05' > 
  2. Transcript 'KH2012:KH.S761.8.v1....'

Transcript Model

Transcript Id

KH2012:KH.S761.8.v1.A.ND2-1

Possible name(s)

SCFD1; STXBP1; VPS45

Gene model

KH2012:KH.S761.8

Location

KhS761 [17,880 / 20,688]

Sequences

Amino acid sequence

Length: 633

>KH.S761.8.v1.A.ND2-1
RGLHCDITEVKMSYSIRERQIGALRSVLNLGAQVTKNIEPEWKVLIYDNAGQDIITPLFS
VADLRNYGVTLYTSLHGQRDAVPDVSAVYFVLPTENNIKRICEDMNNGLYDSYYFNFISA
ISRKKLEDLASAAIHADVASNVMKIFDQYVNFTTLEHDLFELNSASDLSYYNFNKSNLKD
HEMDEIINAIVDGLYCVFVTMGTIPIIRCPTGNAAEMVATKLDKKLRDNLKDARNSFFSL
TNTMVEPGQQITNFQRPLLLIADRNIDLATPLHHTWTYQALVHDVLDMKLNKVIVTETVD
DNAMARPMKTQSFNLGSTDKFWHQHRGNPFPQVAEAVQEEIEEYKSHEGEVQRLKAVMGL
AESDQAVDISDNTAKLTSAMSSLPQLLEKKRLIDIHTTIATAVLGSIKERKLDEYFETEE
KLMSKTTGEKPLIEFLRDSKGGSPEDKMRLFLIYYICQSQVNDLDELIRALEDSGCDIDA
LKYVKRWKQYTMVGDVGVRGGGTKTIGMFSHLMSTGSQFVMEGVKNLVLKKHKLPLTKIL
DNLMELKSNQEIDSYRYFDPKLARALDTSMGRAKAPYTDAVVFVVGGGNYIEYHNIMEYS
RNKPGRRVAYGCSQLLNANQFLQQLCQLGKEIQ

Nucleotide sequence

Length: 2,435

>KH2012:KH.S761.8.v1.A.ND2-1
AAAATTTAAACAAATAAAACATAGCATTTCTATGAATCTGTATTCTGCAACGTTCGGGAT
TCCCCAGATATTCTAGAATTTGTGACGTGGATTACATTGTGACATCACAGAAGTTAAAAT
GTCTTACTCGATTCGTGAACGACAAATTGGAGCTCTTAGATCTGTTTTAAACTTAGGAGC
GCAAGTTACAAAGAATATTGAACCAGAATGGAAGGTTTTGATTTACGATAACGCTGGCCA
AGATATTATTACCCCGCTGTTCTCGGTGGCCGATCTTCGTAATTATGGAGTTACGTTGTA
CACCTCGCTTCACGGGCAACGAGATGCTGTGCCCGATGTTTCAGCTGTTTATTTTGTTTT
ACCAACCGAAAATAACATCAAGCGAATATGCGAAGACATGAACAATGGACTTTACGATTC
GTATTATTTCAACTTTATTTCAGCGATCTCACGTAAGAAACTGGAAGATCTCGCAAGTGC
AGCCATACATGCCGATGTCGCGTCAAATGTTATGAAGATATTTGACCAATATGTCAACTT
TACGACACTTGAACATGATCTGTTCGAATTGAATTCTGCATCTGATCTATCTTATTATAA
TTTCAACAAATCGAATTTGAAAGATCACGAGATGGATGAAATAATCAACGCGATTGTTGA
TGGGTTATATTGTGTGTTTGTTACCATGGGTACGATCCCCATCATCCGATGTCCAACGGG
TAATGCTGCTGAAATGGTTGCCACAAAGTTAGACAAGAAGTTACGTGATAATTTGAAAGA
CGCGCGGAATAGTTTCTTTAGCCTTACAAATACAATGGTTGAACCTGGACAACAAATAAC
GAACTTTCAACGACCTTTGCTACTTATAGCTGATCGAAATATTGACCTCGCGACCCCTCT
ACATCATACATGGACGTACCAAGCTTTGGTACACGACGTACTTGACATGAAGCTAAACAA
AGTGATTGTTACGGAGACAGTGGATGACAATGCTATGGCTCGTCCAATGAAAACGCAAAG
TTTTAATCTTGGTTCCACGGATAAATTCTGGCATCAACACAGGGGAAACCCCTTCCCACA
AGTGGCTGAGGCTGTGCAAGAAGAAATTGAGGAATATAAGTCGCACGAAGGTGAGGTACA
ACGCTTGAAGGCCGTCATGGGATTGGCCGAATCAGATCAAGCCGTTGATATTTCTGACAA
CACGGCCAAACTAACATCGGCCATGAGTTCGTTGCCTCAGCTTTTGGAGAAGAAAAGATT
AATCGATATTCATACAACGATCGCTACTGCTGTGCTGGGGAGTATTAAAGAACGGAAATT
GGACGAATATTTTGAAACTGAGGAAAAGTTGATGAGCAAAACAACAGGAGAAAAACCATT
GATTGAATTTCTTAGAGATTCAAAAGGGGGATCCCCTGAAGATAAAATGAGATTGTTTCT
AATTTATTATATTTGCCAATCACAAGTAAATGATTTAGATGAATTGATCCGGGCATTGGA
AGATTCCGGTTGCGACATCGATGCGTTAAAATACGTGAAACGATGGAAACAATACACTAT
GGTCGGCGACGTAGGGGTCAGGGGGGGTGGAACCAAAACTATCGGGATGTTTTCGCATCT
TATGAGTACAGGGTCGCAGTTTGTAATGGAGGGCGTGAAAAACTTAGTTTTGAAGAAACA
TAAACTTCCTCTCACCAAGATACTTGACAACCTGATGGAACTAAAGTCCAACCAAGAAAT
TGATTCTTATCGTTACTTTGACCCTAAACTTGCCCGAGCGCTCGACACAAGCATGGGGCG
CGCTAAAGCTCCTTATACAGATGCTGTAGTGTTTGTGGTTGGAGGTGGCAACTATATCGA
GTATCACAACATCATGGAGTATTCGCGCAACAAACCTGGAAGGAGGGTTGCTTATGGTTG
TAGCCAACTACTCAACGCAAACCAATTCCTTCAACAATTATGCCAACTTGGAAAGGAAAT
TCAATAATTTATATTGTGTGTAAATAATAATGATTGTTGTAAATAAATAAAGATATTATG
ATGTCATAAACTGTTCATGCATCAAATAAAGTTGCGAGATTAATTTGATTTCTATGTTTT
CACTTGTTGCGTTTACATTCACCACAGATGATGATGTCACAATGATGACGTTGTTATATC
GAGTTTCGAGTAAGTTACCAACAACCACTTGGTGGCCATAGTTAGAAAGAGCCAACCGAC
ATTTTGAGATCAAAATATTTTCGTCGGTTTCGAGTTTAAATGAAACAACGAACGCATTGA
ATGCCCATTGTTGTGCCACGTGCCCTAACATCTTTGGTGTTCGTTCCAATGTTAGCGCCA
AACTTTCACTGGATTGTATCTTATGTAGGGGGAGTTTATCATCGGGGACATAGAAATCTG
ATACTGCAGCAGCAAGGTACACTGCTGCCCTCTTG

InterProScan

SUPERFAMILY
Sec1-like_sf (IPR036045) - T[12-631] 2.75E-150
PANTHER
Sec1-like (IPR001619) - T[13-629] 6.2E-235
PIRSF
Sec1-like (IPR001619) - T[14-633] 7.3E-68
Pfam
Sec1-like (IPR001619) - T[43-624] 1.1E-120
Gene3D
Sec-1-like_dom2 (IPR027482) - T[155-274] 4.4E-138 - T[535-628] 4.4E-138

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VPS45_HUMAN 22.712 % 120 1.51E-28
STXB2_HUMAN 21.451 % 83.2 1.18E-16
SCFD1_HUMAN 57.662 % 731 0