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TRANSCRIPT CARD

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  1. Clone 'ma164m21' > 
  2. Transcript 'Cisavi.CG.ENS81.R72....' > 
  3. Clone 'cima866359' > 
  4. Clone 'ma107h05' > 
  5. Transcript 'KH2012:KH.S761.8.v1....'

Transcript Model

Transcript Id

KH2012:KH.S761.8.v1.A.nonSL3-1

Possible name(s)

SCFD1; STXBP1; VPS45

Gene model

KH2012:KH.S761.8

Location

KhS761 [17,956 / 20,688]

Sequences

Amino acid sequence

Length: 633

>KH.S761.8.v1.A.nonSL3-1
RGLHCDITEVKMSYSIRERQIGALRSVLNLGAQVTKNIEPEWKVLIYDNAGQDIITPLFS
VADLRNYGVTLYTSLHGQRDAVPDVSAVYFVLPTENNIKRICEDMNNGLYDSYYFNFISA
ISRKKLEDLASAAIHADVASNVMKIFDQYVNFTTLEHDLFELNSASDLSYYNFNKSNLKD
HEMDEIINAIVDGLYCVFVTMGTIPIIRCPTGNAAEMVATKLDKKLRDNLKDARNSFFSL
TNTMVEPGQQITNFQRPLLLIADRNIDLATPLHHTWTYQALVHDVLDMKLNKVIVTETVD
DNAMARPMKTQSFNLGSTDKFWHQHRGNPFPQVAEAVQEEIEEYKSHEGEVQRLKAVMGL
AESDQAVDISDNTAKLTSAMSSLPQLLEKKRLIDIHTTIATAVLGSIKERKLDEYFETEE
KLMSKTTGEKPLIEFLRDSKGGSPEDKMRLFLIYYICQSQVNDLDELIRALEDSGCDIDA
LKYVKRWKQYTMVGDVGVRGGGTKTIGMFSHLMSTGSQFVMEGVKNLVLKKHKLPLTKIL
DNLMELKSNQEIDSYRYFDPKLARALDTSMGRAKAPYTDAVVFVVGGGNYIEYHNIMEYS
RNKPGRRVAYGCSQLLNANQFLQQLCQLGKEIQ

Nucleotide sequence

Length: 2,359

>KH2012:KH.S761.8.v1.A.nonSL3-1
AATTTGTGACGTGGATTACATTGTGACATCACAGAAGTTAAAATGTCTTACTCGATTCGT
GAACGACAAATTGGAGCTCTTAGATCTGTTTTAAACTTAGGAGCGCAAGTTACAAAGAAT
ATTGAACCAGAATGGAAGGTTTTGATTTACGATAACGCTGGCCAAGATATTATTACCCCG
CTGTTCTCGGTGGCCGATCTTCGTAATTATGGAGTTACGTTGTACACCTCGCTTCACGGG
CAACGAGATGCTGTGCCCGATGTTTCAGCTGTTTATTTTGTTTTACCAACCGAAAATAAC
ATCAAGCGAATATGCGAAGACATGAACAATGGACTTTACGATTCGTATTATTTCAACTTT
ATTTCAGCGATCTCACGTAAGAAACTGGAAGATCTCGCAAGTGCAGCCATACATGCCGAT
GTCGCGTCAAATGTTATGAAGATATTTGACCAATATGTCAACTTTACGACACTTGAACAT
GATCTGTTCGAATTGAATTCTGCATCTGATCTATCTTATTATAATTTCAACAAATCGAAT
TTGAAAGATCACGAGATGGATGAAATAATCAACGCGATTGTTGATGGGTTATATTGTGTG
TTTGTTACCATGGGTACGATCCCCATCATCCGATGTCCAACGGGTAATGCTGCTGAAATG
GTTGCCACAAAGTTAGACAAGAAGTTACGTGATAATTTGAAAGACGCGCGGAATAGTTTC
TTTAGCCTTACAAATACAATGGTTGAACCTGGACAACAAATAACGAACTTTCAACGACCT
TTGCTACTTATAGCTGATCGAAATATTGACCTCGCGACCCCTCTACATCATACATGGACG
TACCAAGCTTTGGTACACGACGTACTTGACATGAAGCTAAACAAAGTGATTGTTACGGAG
ACAGTGGATGACAATGCTATGGCTCGTCCAATGAAAACGCAAAGTTTTAATCTTGGTTCC
ACGGATAAATTCTGGCATCAACACAGGGGAAACCCCTTCCCACAAGTGGCTGAGGCTGTG
CAAGAAGAAATTGAGGAATATAAGTCGCACGAAGGTGAGGTACAACGCTTGAAGGCCGTC
ATGGGATTGGCCGAATCAGATCAAGCCGTTGATATTTCTGACAACACGGCCAAACTAACA
TCGGCCATGAGTTCGTTGCCTCAGCTTTTGGAGAAGAAAAGATTAATCGATATTCATACA
ACGATCGCTACTGCTGTGCTGGGGAGTATTAAAGAACGGAAATTGGACGAATATTTTGAA
ACTGAGGAAAAGTTGATGAGCAAAACAACAGGAGAAAAACCATTGATTGAATTTCTTAGA
GATTCAAAAGGGGGATCCCCTGAAGATAAAATGAGATTGTTTCTAATTTATTATATTTGC
CAATCACAAGTAAATGATTTAGATGAATTGATCCGGGCATTGGAAGATTCCGGTTGCGAC
ATCGATGCGTTAAAATACGTGAAACGATGGAAACAATACACTATGGTCGGCGACGTAGGG
GTCAGGGGGGGTGGAACCAAAACTATCGGGATGTTTTCGCATCTTATGAGTACAGGGTCG
CAGTTTGTAATGGAGGGCGTGAAAAACTTAGTTTTGAAGAAACATAAACTTCCTCTCACC
AAGATACTTGACAACCTGATGGAACTAAAGTCCAACCAAGAAATTGATTCTTATCGTTAC
TTTGACCCTAAACTTGCCCGAGCGCTCGACACAAGCATGGGGCGCGCTAAAGCTCCTTAT
ACAGATGCTGTAGTGTTTGTGGTTGGAGGTGGCAACTATATCGAGTATCACAACATCATG
GAGTATTCGCGCAACAAACCTGGAAGGAGGGTTGCTTATGGTTGTAGCCAACTACTCAAC
GCAAACCAATTCCTTCAACAATTATGCCAACTTGGAAAGGAAATTCAATAATTTATATTG
TGTGTAAATAATAATGATTGTTGTAAATAAATAAAGATATTATGATGTCATAAACTGTTC
ATGCATCAAATAAAGTTGCGAGATTAATTTGATTTCTATGTTTTCACTTGTTGCGTTTAC
ATTCACCACAGATGATGATGTCACAATGATGACGTTGTTATATCGAGTTTCGAGTAAGTT
ACCAACAACCACTTGGTGGCCATAGTTAGAAAGAGCCAACCGACATTTTGAGATCAAAAT
ATTTTCGTCGGTTTCGAGTTTAAATGAAACAACGAACGCATTGAATGCCCATTGTTGTGC
CACGTGCCCTAACATCTTTGGTGTTCGTTCCAATGTTAGCGCCAAACTTTCACTGGATTG
TATCTTATGTAGGGGGAGTTTATCATCGGGGACATAGAAATCTGATACTGCAGCAGCAAG
GTACACTGCTGCCCTCTTG

InterProScan

SUPERFAMILY
Sec1-like_sf (IPR036045) - T[12-631] 2.75E-150
PANTHER
Sec1-like (IPR001619) - T[13-629] 6.2E-235
PIRSF
Sec1-like (IPR001619) - T[14-633] 7.3E-68
Pfam
Sec1-like (IPR001619) - T[43-624] 1.1E-120
Gene3D
Sec-1-like_dom2 (IPR027482) - T[155-274] 4.4E-138 - T[535-628] 4.4E-138

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VPS45_HUMAN 22.712 % 120 1.51E-28
STXB2_HUMAN 21.451 % 83.2 1.18E-16
SCFD1_HUMAN 57.662 % 731 0