- Transcript 'Moocci.CG.ELv1_2.S54...' >
- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.S781.11.v1...'
Transcript Model
Transcript Id
KH2012:KH.S781.11.v1.A.SL1-1
Possible name(s)
SCX; TAL2; TCF15
Gene model
Location
KhS781 [19,179 / 20,800]
Amino acid sequence
Length: 207
>KH.S781.11.v1.A.SL1-1
VVSYDVIVCYFRTLCIMPDHVVHTSNEAYMTSHYPFSSELGDILDESVCRKQDFDWAGSH
QSQPITTKVSLPPLSSVFGNKTVYDVTNPSYVTPPWQPVVIQPNRAITSQSHHVTMKRKI
SKKKNGREKGKTPNVNLAFQELRTLIPTDPVDRRLSKVETLRLAVSYINHLCETLNCDVM
VEQPCQSRGNVCTFCISRSRHASTVRL
Nucleotide sequence
Length: 1,182
>KH2012:KH.S781.11.v1.A.SL1-1
AGAGGTTTAGGTTGTTTCATATGACGTCATAGTATGTTATTTTAGAACCCTTTGCATTAT
GCCAGATCACGTGGTTCATACGTCAAACGAAGCGTATATGACGTCACACTACCCATTCTC
CAGTGAACTTGGAGACATTCTTGATGAATCGGTTTGTAGGAAGCAGGATTTTGATTGGGC
GGGTTCGCATCAGAGCCAACCAATCACAACCAAGGTATCGCTGCCTCCACTGTCTTCTGT
GTTCGGGAATAAAACTGTTTATGACGTCACTAACCCAAGTTACGTCACGCCACCATGGCA
ACCTGTGGTCATTCAACCGAACCGTGCAATTACGTCACAATCACACCACGTCACGATGAA
AAGGAAAATATCAAAGAAAAAAAATGGAAGAGAAAAGGGAAAAACCCCTAATGTGAACCT
AGCGTTCCAGGAGTTACGAACTTTAATTCCAACGGATCCTGTTGACCGGAGGTTGTCGAA
AGTTGAAACTTTGAGGTTGGCCGTCAGTTATATCAACCATCTATGTGAAACATTGAATTG
TGACGTCATGGTGGAGCAACCGTGCCAGTCACGTGGTAATGTTTGTACGTTCTGCATCAG
TAGGTCTCGTCACGCTTCGACGGTTCGATTGTGACAACAGTTGTTAAGCTATTGTTAGCT
GTCACGTGGTTACCTGGCAGTTGCCGATTATTACGTCATAGTAGATAGCGTCATAACCAC
GTGACAGCTGCAAAACAATCGGCATGGCTACCCACACCTCAAGATGCTTATTGTGACGTA
CAATTGTTATTGTTTTAATTTAATTGTAATCGACGAATATCCTTCACACCACTGTGACGT
AACAAACATCAACTATTTCCATTTCCACTTCTGTCGAACGTTTGTGACGTCACAATCCTG
TACCCAAACTTTCGCGGTGGAAGCGGTCAAACATAATTGTGTTTCTTTGTTTGTTATCTT
CCCGCTCTGTGACGTCATAAACATTATTATAACCATCACAAATATAATATTTATATTTAA
ACCTCTGATATTTCCCACTGCTGGCTAGGTGGCGCTGTCTCGTGGTTGTCAAACGGAAAC
TTACATCTTTGTATTTCAACTTTGTGTGATGACGTCACACCAACGCATACGTCACGAACG
CTATTATGACGTAACTCGTTCTGAATAATAAAGCATTGTTTG
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[114-180] 3.7E-18 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[119-171] 14.811 |
| CDD |
bHLH_dom (IPR011598) - T[122-171] 2.21766E-14 |
| Pfam |
bHLH_dom (IPR011598) - T[122-171] 2.0E-14 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[122-197] 4.45E-15 |
| SMART |
bHLH_dom (IPR011598) - T[125-177] 3.1E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCF15_HUMAN | 41.905 % | 75.9 | 3.68E-17 |