- Transcript 'KH2012:KH.S899.5.v1....'
Transcript Model
Transcript Id
KH2012:KH.S899.5.v1.A.nonSL4-1
Possible name(s)
PRPF19; WDR27; WDR47
Gene model
Location
KhS899 [9,821 / 13,996]
Amino acid sequence
Length: 246
>KH.S899.5.v1.A.nonSL4-1
QRTTALRFSIFGDEDRKQRQTKEIVSSQFYYLDKFILLGCGNSLSLFKFHLEEKSGDEIK
RYLWKGRSKLVCSREATLGQNISSFSAANNYYSYIVLVGGSDRNINIYDFNVCKTIGIYE
NAHSKPTHTIDIATGSSIVTSSNDLFMTSAFSDGIKLWDLRSTSSILKLNQHSNKTKSSS
CVTPCGKYIATTCDEKSVYLYDCRSFHPLQILKLKSKPTSVSFTPCSTQLLVGTDSSKVL
GFSVKK
Nucleotide sequence
Length: 1,425
>KH2012:KH.S899.5.v1.A.nonSL4-1
GAAAACCAGGGAGTTGTGTAAAAGTTGCTGCAGCGAAATGTTGAAAATACGAAAAGTCTG
GAGTTTTCAAAATATTTCGAATAATAGCTCGAAATATGACGTCACAGACACCGCGTTGGC
GGTTTCGAATGATAATGACGTCACACTGTGGAATTTAAACGAGGGTTTGCCAGATGAGGG
TATTTTATTACACGGCCATCACGCCCAAGTTACCACGGTAACTTTCTCCCGTCACCATGG
AAACGATGACGTCATACTTGCGACAGGAGCATCTGATTACATCATCGTGTGGAAGCTCGG
GGAGGTTTTGGCGGCGCATAATAATGGAACTTTGGTCCGAGGCCACATCTTTAGTTCCAC
ATCGGGGGAATCCCCCAATATTCTTCGATTCTCCCCGAGCACAAAGTACCTTTGTGATGT
CACAGACAACGAACTCATGGTTTATGATTATGACAACACAAAGATTATTTTCACGGAACC
TTGCCGAGATGTTTCGTCGATAGATTTCCAATCTGACACTCTGGTTGCCGTGGTAACAAC
AACGGGGAGGATTAATATTTGGGATGTTGCTCAATGTTGCCTCGTGTGGCAGCATACCAT
GGTGCAGGGGTTATCATGCCTGACAGCGAACGACTGCTTTGAGGTTTTCCATATTTGGTG
ACGAGGATAGAAAGCAACGTCAAACAAAGGAAATTGTTTCGTCACAATTTTATTATTTGG
ATAAATTTATTTTGCTTGGTTGCGGAAATTCCTTGTCTTTGTTTAAATTTCATCTGGAGG
AAAAGAGTGGAGATGAAATCAAAAGATATTTATGGAAAGGTAGATCCAAGTTGGTTTGTT
CGCGAGAAGCAACGTTGGGGCAAAACATTTCAAGTTTTTCTGCGGCAAATAATTATTATT
CATACATCGTGTTGGTTGGAGGATCGGATCGAAACATTAATATATATGATTTCAATGTTT
GTAAAACCATTGGTATTTACGAGAATGCTCACAGCAAACCAACGCATACTATCGACATTG
CTACGGGTTCATCTATTGTGACATCATCAAATGATTTGTTTATGACATCAGCATTTTCTG
ACGGAATCAAACTTTGGGATTTACGATCGACAAGTTCGATTCTTAAATTGAACCAACATT
CGAACAAAACAAAGAGTAGCTCATGTGTGACACCTTGTGGAAAGTATATTGCAACAACTT
GCGACGAGAAATCGGTTTACCTTTACGATTGCAGAAGTTTCCACCCACTTCAAATATTAA
AATTAAAATCCAAACCGACGAGTGTCAGTTTCACCCCGTGTTCAACACAGTTGTTGGTCG
GAACAGATTCGTCAAAAGTTTTGGGTTTTTCTGTCAAAAAGTGAACTATTATGACATCAC
AGTAACTTTGTGTTTAATTGTTTTTAATTAAATTATTTTCAAGTA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[11-246] 2.2E-22 |
| SMART |
WD40_repeat (IPR001680) - T[67-109] 22.0 - T[123-159] 6.5 - T[162-202] 1.4 - T[205-243] 31.0 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[68-244] 4.27E-23 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[77-211] 9.415 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR27_HUMAN | 35.065 % | 144 | 3.26E-39 |