- Clone 'cien196388' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.S899.5.v1....'
Transcript Model
Transcript Id
KH2012:KH.S899.5.v1.A.SL3-1
Possible name(s)
PRPF19; WDR27; WDR47
Gene model
Location
KhS899 [9,793 / 13,996]
Amino acid sequence
Length: 246
>KH.S899.5.v1.A.SL3-1
QRTTALRFSIFGDEDRKQRQTKEIVSSQFYYLDKFILLGCGNSLSLFKFHLEEKSGDEIK
RYLWKGRSKLVCSREATLGQNISSFSAANNYYSYIVLVGGSDRNINIYDFNVCKTIGIYE
NAHSKPTHTIDIATGSSIVTSSNDLFMTSAFSDGIKLWDLRSTSSILKLNQHSNKTKSSS
CVTPCGKYIATTCDEKSVYLYDCRSFHPLQILKLKSKPTSVSFTPCSTQLLVGTDSSKVL
GFSVKK
Nucleotide sequence
Length: 1,453
>KH2012:KH.S899.5.v1.A.SL3-1
GAATAAGAAAAAGGCAAACAAAATGTTTGAAAACCAGGGAGTTGTGTAAAAGTTGCTGCA
GCGAAATGTTGAAAATACGAAAAGTCTGGAGTTTTCAAAATATTTCGAATAATAGCTCGA
AATATGACGTCACAGACACCGCGTTGGCGGTTTCGAATGATAATGACGTCACACTGTGGA
ATTTAAACGAGGGTTTGCCAGATGAGGGTATTTTATTACACGGCCATCACGCCCAAGTTA
CCACGGTAACTTTCTCCCGTCACCATGGAAACGATGACGTCATACTTGCGACAGGAGCAT
CTGATTACATCATCGTGTGGAAGCTCGGGGAGGTTTTGGCGGCGCATAATAATGGAACTT
TGGTCCGAGGCCACATCTTTAGTTCCACATCGGGGGAATCCCCCAATATTCTTCGATTCT
CCCCGAGCACAAAGTACCTTTGTGATGTCACAGACAACGAACTCATGGTTTATGATTATG
ACAACACAAAGATTATTTTCACGGAACCTTGCCGAGATGTTTCGTCGATAGATTTCCAAT
CTGACACTCTGGTTGCCGTGGTAACAACAACGGGGAGGATTAATATTTGGGATGTTGCTC
AATGTTGCCTCGTGTGGCAGCATACCATGGTGCAGGGGTTATCATGCCTGACAGCGAACG
ACTGCTTTGAGGTTTTCCATATTTGGTGACGAGGATAGAAAGCAACGTCAAACAAAGGAA
ATTGTTTCGTCACAATTTTATTATTTGGATAAATTTATTTTGCTTGGTTGCGGAAATTCC
TTGTCTTTGTTTAAATTTCATCTGGAGGAAAAGAGTGGAGATGAAATCAAAAGATATTTA
TGGAAAGGTAGATCCAAGTTGGTTTGTTCGCGAGAAGCAACGTTGGGGCAAAACATTTCA
AGTTTTTCTGCGGCAAATAATTATTATTCATACATCGTGTTGGTTGGAGGATCGGATCGA
AACATTAATATATATGATTTCAATGTTTGTAAAACCATTGGTATTTACGAGAATGCTCAC
AGCAAACCAACGCATACTATCGACATTGCTACGGGTTCATCTATTGTGACATCATCAAAT
GATTTGTTTATGACATCAGCATTTTCTGACGGAATCAAACTTTGGGATTTACGATCGACA
AGTTCGATTCTTAAATTGAACCAACATTCGAACAAAACAAAGAGTAGCTCATGTGTGACA
CCTTGTGGAAAGTATATTGCAACAACTTGCGACGAGAAATCGGTTTACCTTTACGATTGC
AGAAGTTTCCACCCACTTCAAATATTAAAATTAAAATCCAAACCGACGAGTGTCAGTTTC
ACCCCGTGTTCAACACAGTTGTTGGTCGGAACAGATTCGTCAAAAGTTTTGGGTTTTTCT
GTCAAAAAGTGAACTATTATGACATCACAGTAACTTTGTGTTTAATTGTTTTTAATTAAA
TTATTTTCAAGTA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[11-246] 2.2E-22 |
| SMART |
WD40_repeat (IPR001680) - T[67-109] 22.0 - T[123-159] 6.5 - T[162-202] 1.4 - T[205-243] 31.0 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[68-244] 4.27E-23 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[77-211] 9.415 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR27_HUMAN | 35.065 % | 144 | 3.26E-39 |