- Transcript 'Boschl.CG.Botznik201...' >
- Clone 'cien77375' >
- Clone 'ma312h02' >
- Clone 'AHC0AAA136YJ18' >
- Transcript 'KH2012:KH.S899.5.v2....'
Transcript Model
Transcript Id
KH2012:KH.S899.5.v2.A.nonSL4-1
Possible name(s)
PRPF19; WDR27; WDR47
Gene model
Location
KhS899 [9,821 / 13,996]
Amino acid sequence
Length: 794
>KH.S899.5.v2.A.nonSL4-1
KTRELCKSCCSEMLKIRKVWSFQNISNNSSKYDVTDTALAVSNDNDVTLWNLNEGLPDEG
ILLHGHHAQVTTVTFSRHHGNDDVILATGASDYIIVWKLGEVLAAHNNGTLVRGHIFSST
SGESPNILRFSPSTKYLCDVTDNELMVYDYDNTKIIFTEPCRDVSSIDFQSDTLVAVVTT
TGRINIWDVAQCCLVWQHTMVQGLSCLTANEYQLFVTSVSSKETFNLLARYFQIHGFVAN
PEPRLHFQKDLDLCLLHHNWDGDVTKGIVLSLLCVESPHCDVTSRSSVTFVLCAMNRVIV
AINCDNQESTVMQYMDCDIIEPIVASQACLSQDPKTKKITCCVTSMLDPTTHVFHLTLPT
PSNPLCNPTTPTFVSAAPLADTSPLRGQIKFNKTATPTNDQPITFKHKVRSSGYKSSPRM
SMFNPKTNKPKKVTKTLKPERRETEPSDWSMLMTSQGEATCCSAPVSVRSIPVDETTKQF
ASLLNDNSVLVMSLPLLASNNKTKHVTGASNTLGCSWSHGASWLGASRHGGWLLTHTKDT
VAVWENPYTNTAALRFSIFGDEDRKQRQTKEIVSSQFYYLDKFILLGCGNSLSLFKFHLE
EKSGDEIKRYLWKGRSKLVCSREATLGQNISSFSAANNYYSYIVLVGGSDRNINIYDFNV
CKTIGIYENAHSKPTHTIDIATGSSIVTSSNDLFMTSAFSDGIKLWDLRSTSSILKLNQH
SNKTKSSSCVTPCGKYIATTCDEKSVYLYDCRSFHPLQILKLKSKPTSVSFTPCSTQLLV
GTDSSKVLGFSVKK
Nucleotide sequence
Length: 2,447
>KH2012:KH.S899.5.v2.A.nonSL4-1
GAAAACCAGGGAGTTGTGTAAAAGTTGCTGCAGCGAAATGTTGAAAATACGAAAAGTCTG
GAGTTTTCAAAATATTTCGAATAATAGCTCGAAATATGACGTCACAGACACCGCGTTGGC
GGTTTCGAATGATAATGACGTCACACTGTGGAATTTAAACGAGGGTTTGCCAGATGAGGG
TATTTTATTACACGGCCATCACGCCCAAGTTACCACGGTAACTTTCTCCCGTCACCATGG
AAACGATGACGTCATACTTGCGACAGGAGCATCTGATTACATCATCGTGTGGAAGCTCGG
GGAGGTTTTGGCGGCGCATAATAATGGAACTTTGGTCCGAGGCCACATCTTTAGTTCCAC
ATCGGGGGAATCCCCCAATATTCTTCGATTCTCCCCGAGCACAAAGTACCTTTGTGATGT
CACAGACAACGAACTCATGGTTTATGATTATGACAACACAAAGATTATTTTCACGGAACC
TTGCCGAGATGTTTCGTCGATAGATTTCCAATCTGACACTCTGGTTGCCGTGGTAACAAC
AACGGGGAGGATTAATATTTGGGATGTTGCTCAATGTTGCCTCGTGTGGCAGCATACCAT
GGTGCAGGGGTTATCATGCCTGACAGCGAACGAGTATCAACTTTTCGTAACTTCTGTTTC
CTCGAAGGAAACTTTCAATCTTCTTGCTCGTTATTTCCAGATCCATGGATTTGTCGCGAA
CCCCGAACCTCGGCTTCACTTTCAGAAAGATCTCGATCTTTGTTTGTTACATCATAATTG
GGATGGTGATGTAACAAAGGGGATTGTTTTGTCATTATTATGCGTTGAATCACCTCATTG
TGATGTCACAAGTCGATCAAGCGTAACGTTCGTGTTGTGTGCGATGAACCGCGTCATCGT
TGCGATTAATTGTGACAATCAGGAATCAACTGTGATGCAATATATGGATTGTGACATCAT
TGAACCCATTGTTGCATCACAAGCATGTTTGTCACAGGATCCGAAAACAAAGAAGATAAC
GTGCTGCGTCACCTCAATGTTGGACCCCACCACCCATGTATTCCACCTAACCCTGCCAAC
CCCCAGTAACCCCCTTTGTAACCCCACAACCCCCACTTTCGTATCCGCCGCTCCACTGGC
TGACACATCACCCCTTAGGGGTCAAATAAAGTTCAACAAAACTGCCACGCCCACAAATGA
CCAACCAATCACCTTCAAACACAAAGTCAGAAGTTCCGGCTACAAATCTTCCCCAAGGAT
GTCTATGTTCAACCCTAAAACCAACAAGCCAAAAAAAGTTACGAAAACGTTGAAGCCGGA
ACGTCGGGAAACGGAGCCATCTGATTGGTCGATGTTGATGACATCACAAGGGGAGGCGAC
GTGTTGTTCCGCACCAGTGAGCGTTCGTTCGATCCCAGTTGATGAAACAACAAAGCAGTT
TGCCTCGCTGTTGAACGATAATAGTGTCCTAGTAATGTCACTCCCACTGCTAGCATCTAA
CAACAAAACGAAACATGTGACAGGGGCGAGCAATACATTAGGATGTTCGTGGTCACATGG
GGCAAGTTGGCTCGGGGCAAGTCGGCACGGGGGTTGGTTACTTACGCATACTAAGGATAC
TGTGGCTGTGTGGGAAAACCCCTATACCAATACAGCTGCTTTGAGGTTTTCCATATTTGG
TGACGAGGATAGAAAGCAACGTCAAACAAAGGAAATTGTTTCGTCACAATTTTATTATTT
GGATAAATTTATTTTGCTTGGTTGCGGAAATTCCTTGTCTTTGTTTAAATTTCATCTGGA
GGAAAAGAGTGGAGATGAAATCAAAAGATATTTATGGAAAGGTAGATCCAAGTTGGTTTG
TTCGCGAGAAGCAACGTTGGGGCAAAACATTTCAAGTTTTTCTGCGGCAAATAATTATTA
TTCATACATCGTGTTGGTTGGAGGATCGGATCGAAACATTAATATATATGATTTCAATGT
TTGTAAAACCATTGGTATTTACGAGAATGCTCACAGCAAACCAACGCATACTATCGACAT
TGCTACGGGTTCATCTATTGTGACATCATCAAATGATTTGTTTATGACATCAGCATTTTC
TGACGGAATCAAACTTTGGGATTTACGATCGACAAGTTCGATTCTTAAATTGAACCAACA
TTCGAACAAAACAAAGAGTAGCTCATGTGTGACACCTTGTGGAAAGTATATTGCAACAAC
TTGCGACGAGAAATCGGTTTACCTTTACGATTGCAGAAGTTTCCACCCACTTCAAATATT
AAAATTAAAATCCAAACCGACGAGTGTCAGTTTCACCCCGTGTTCAACACAGTTGTTGGT
CGGAACAGATTCGTCAAAAGTTTTGGGTTTTTCTGTCAAAAAGTGAACTATTATGACATC
ACAGTAACTTTGTGTTTAATTGTTTTTAATTAAATTATTTTCAAGTA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[6-232] 9.0E-14 - T[415-794] 1.5E-18 |
| SUPERFAMILY |
Quinoprotein_ADH-like_supfam (IPR011047) - T[32-212] 2.04E-24 - T[603-792] 2.04E-24 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[39-107] 8.94 - T[625-759] 9.415 |
| SMART |
WD40_repeat (IPR001680) - T[56-98] 4.7 - T[150-188] 3.5 - T[615-657] 22.0 - T[671-707] 6.5 - T[710-750] 1.4 - T[753-791] 31.0 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[459-692] 4.58E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR27_HUMAN | 24.286 % | 199 | 1.34E-53 |