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  1. Transcript 'KH2012:KH.S966.3.v1....'

Transcript Model

Transcript Id

KH2012:KH.S966.3.v1.A.nonSL3-1

Possible name(s)

VIPAS39

Location

KhS966 [11,458 / 14,453]

Sequences

Amino acid sequence

Length: 499

>KH.S966.3.v1.A.nonSL3-1
MASARKKTTATVSDEVYWNSSVLSPFNFNDDEENEDSIDVITWDGTNTSVSSKSQPNIKS
QPTASVHGTQATAPVHGTHVTSARYTPRKAYNSTTTKLDQPRPTPDTRSITDVVNDKKNS
PTTTDIVKLESEVATLRRQLTQAKRDRAVAPSKSDTLRRIMVGEACLLELYKSKEDKCSL
LDAAIERFDGNAIVAATLFMRDTLKRDLFSKELMRRGAAVDHYCAYLRAAGEVDELHETL
SAIGLTEEAAVLKYRQCLTNTSSTTPEIRASGLKDCIKYYFDSDIRLANETSAIQEQISL
MRRQSVVDDGDKASQASGQVPVFKSHPRKECITHKSVVTTLYYFCYYHWGEAEGLLSSPT
SLRNEHKIAEKQFVFTAIAALCKMRRWRDLENLLTTPRTLFRNSRLHANIGFDKVVDVLS
KNLAPPDALAKYCAEVESVDKRLELSVRLKCHKVAIDTIIHLRDRQQLMSYLDQIPQSNQ
HMRQYLTNNVRSQEIKWRN

Nucleotide sequence

Length: 1,745

>KH2012:KH.S966.3.v1.A.nonSL3-1
AAAGTTGGTTGTTGAATTAAATGGCTTCGGCGAGGAAAAAGACGACAGCAACAGTTAGCG
ATGAAGTTTATTGGAACAGCAGTGTTTTGTCTCCGTTTAATTTCAACGACGATGAAGAGA
ATGAAGATAGCATCGATGTTATAACATGGGATGGAACGAACACTTCTGTTAGCTCCAAGT
CACAACCCAATATTAAAAGCCAACCAACGGCCTCGGTTCATGGCACACAGGCTACGGCAC
CAGTCCATGGCACGCATGTCACATCAGCGCGGTACACACCACGTAAAGCTTACAACTCAA
CGACAACGAAACTCGACCAACCACGACCAACGCCGGATACTCGTTCAATTACGGATGTTG
TAAACGACAAGAAGAACAGCCCAACGACAACGGACATCGTTAAACTTGAGTCGGAGGTTG
CAACTTTGCGGCGACAATTGACACAAGCAAAACGTGATCGTGCCGTGGCGCCTTCAAAGT
CGGACACTTTACGCAGAATAATGGTTGGTGAAGCTTGTTTATTGGAGTTGTACAAATCCA
AGGAGGATAAATGTTCGTTACTCGATGCTGCCATTGAGCGTTTTGATGGGAACGCGATTG
TTGCTGCCACGTTGTTTATGAGAGACACTTTAAAAAGAGATTTATTTAGCAAGGAATTAA
TGCGTCGAGGTGCAGCGGTGGATCACTACTGCGCTTATCTACGAGCAGCTGGGGAAGTTG
ATGAATTGCACGAAACATTGAGCGCTATCGGGCTCACAGAGGAAGCTGCCGTGTTAAAGT
ATCGCCAATGTTTAACCAATACGTCGTCAACCACACCTGAGATTCGTGCATCAGGTCTCA
AGGACTGCATCAAATATTATTTTGACTCTGACATCCGGTTGGCAAACGAAACGTCTGCAA
TTCAGGAACAAATCTCGTTAATGCGACGACAATCTGTTGTTGATGATGGGGACAAAGCAT
CACAAGCTAGTGGTCAAGTACCCGTGTTCAAGTCCCACCCAAGAAAGGAATGCATCACCC
ATAAATCTGTCGTCACAACTTTGTATTACTTCTGTTACTACCACTGGGGTGAAGCAGAGG
GTTTACTGAGCAGTCCAACTTCATTGAGGAACGAACACAAAATCGCGGAAAAACAATTTG
TTTTCACAGCGATCGCTGCGCTTTGTAAAATGAGAAGGTGGAGGGATTTGGAAAACCTTC
TTACGACGCCGCGAACGTTGTTCAGGAATTCTCGGCTTCACGCGAACATTGGGTTTGATA
AAGTGGTTGACGTGTTGAGCAAGAACCTTGCGCCCCCTGATGCGTTGGCGAAATATTGTG
CTGAGGTTGAAAGCGTGGACAAGAGGTTGGAGCTGTCGGTTCGATTAAAATGTCACAAAG
TTGCGATTGATACAATTATTCATCTACGAGATCGACAACAACTTATGTCGTATTTGGATC
AAATTCCACAATCCAACCAACATATGCGGCAATATCTGACCAACAATGTTAGGTCACAGG
AAATTAAATGGAGAAACTGAGAAGTGTTCGTGCAATAAAACTTTAAAAAAAAGAATTTTA
TTCGAATTTTTTGGGGCGGCTTTTGTATCCTTGCATTCATTCAATAAAAACGTGATTGAA
TTTCCAAGCAGCAGCAAACGTGATGTATATTACCGCAGTCAGTTTGCCCATGCAGGCATG
TTTGTTTTAAACTCCCAATCTGGCCCTTTGTAACTGAGCGCATGCAAATAAATAAACAAG
GATTG

InterProScan

Gene3D
Vps16_C_sf (IPR038132) - T[165-452] 1.1E-13
Pfam
Vps16_C (IPR006925) - T[361-482] 9.9E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPE39_HUMAN 30.845 % 235 1.6E-71