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  1. Transcript 'KH2012:KH.L4.22.v2.C...'
  2. Transcript 'KH2012:KH.C3.87.v3.C...'
  3. Transcript 'Cisavi.CG.ENS81.R19....'
  4. Transcript 'Cisavi.CG.ENS81.R1.2...'
  5. Transcript 'KH2012:KH.S966.3.v1....'

Transcript Model

Transcript Id

KH2012:KH.S966.3.v1.A.nonSL4-1

Possible name(s)

VIPAS39

Location

KhS966 [11,458 / 14,469]

Sequences

Amino acid sequence

Length: 499

>KH.S966.3.v1.A.nonSL4-1
MASARKKTTATVSDEVYWNSSVLSPFNFNDDEENEDSIDVITWDGTNTSVSSKSQPNIKS
QPTASVHGTQATAPVHGTHVTSARYTPRKAYNSTTTKLDQPRPTPDTRSITDVVNDKKNS
PTTTDIVKLESEVATLRRQLTQAKRDRAVAPSKSDTLRRIMVGEACLLELYKSKEDKCSL
LDAAIERFDGNAIVAATLFMRDTLKRDLFSKELMRRGAAVDHYCAYLRAAGEVDELHETL
SAIGLTEEAAVLKYRQCLTNTSSTTPEIRASGLKDCIKYYFDSDIRLANETSAIQEQISL
MRRQSVVDDGDKASQASGQVPVFKSHPRKECITHKSVVTTLYYFCYYHWGEAEGLLSSPT
SLRNEHKIAEKQFVFTAIAALCKMRRWRDLENLLTTPRTLFRNSRLHANIGFDKVVDVLS
KNLAPPDALAKYCAEVESVDKRLELSVRLKCHKVAIDTIIHLRDRQQLMSYLDQIPQSNQ
HMRQYLTNNVRSQEIKWRN

Nucleotide sequence

Length: 1,761

>KH2012:KH.S966.3.v1.A.nonSL4-1
GTTGTTGTGAAAATTTAAAGTTGGTTGTTGAATTAAATGGCTTCGGCGAGGAAAAAGACG
ACAGCAACAGTTAGCGATGAAGTTTATTGGAACAGCAGTGTTTTGTCTCCGTTTAATTTC
AACGACGATGAAGAGAATGAAGATAGCATCGATGTTATAACATGGGATGGAACGAACACT
TCTGTTAGCTCCAAGTCACAACCCAATATTAAAAGCCAACCAACGGCCTCGGTTCATGGC
ACACAGGCTACGGCACCAGTCCATGGCACGCATGTCACATCAGCGCGGTACACACCACGT
AAAGCTTACAACTCAACGACAACGAAACTCGACCAACCACGACCAACGCCGGATACTCGT
TCAATTACGGATGTTGTAAACGACAAGAAGAACAGCCCAACGACAACGGACATCGTTAAA
CTTGAGTCGGAGGTTGCAACTTTGCGGCGACAATTGACACAAGCAAAACGTGATCGTGCC
GTGGCGCCTTCAAAGTCGGACACTTTACGCAGAATAATGGTTGGTGAAGCTTGTTTATTG
GAGTTGTACAAATCCAAGGAGGATAAATGTTCGTTACTCGATGCTGCCATTGAGCGTTTT
GATGGGAACGCGATTGTTGCTGCCACGTTGTTTATGAGAGACACTTTAAAAAGAGATTTA
TTTAGCAAGGAATTAATGCGTCGAGGTGCAGCGGTGGATCACTACTGCGCTTATCTACGA
GCAGCTGGGGAAGTTGATGAATTGCACGAAACATTGAGCGCTATCGGGCTCACAGAGGAA
GCTGCCGTGTTAAAGTATCGCCAATGTTTAACCAATACGTCGTCAACCACACCTGAGATT
CGTGCATCAGGTCTCAAGGACTGCATCAAATATTATTTTGACTCTGACATCCGGTTGGCA
AACGAAACGTCTGCAATTCAGGAACAAATCTCGTTAATGCGACGACAATCTGTTGTTGAT
GATGGGGACAAAGCATCACAAGCTAGTGGTCAAGTACCCGTGTTCAAGTCCCACCCAAGA
AAGGAATGCATCACCCATAAATCTGTCGTCACAACTTTGTATTACTTCTGTTACTACCAC
TGGGGTGAAGCAGAGGGTTTACTGAGCAGTCCAACTTCATTGAGGAACGAACACAAAATC
GCGGAAAAACAATTTGTTTTCACAGCGATCGCTGCGCTTTGTAAAATGAGAAGGTGGAGG
GATTTGGAAAACCTTCTTACGACGCCGCGAACGTTGTTCAGGAATTCTCGGCTTCACGCG
AACATTGGGTTTGATAAAGTGGTTGACGTGTTGAGCAAGAACCTTGCGCCCCCTGATGCG
TTGGCGAAATATTGTGCTGAGGTTGAAAGCGTGGACAAGAGGTTGGAGCTGTCGGTTCGA
TTAAAATGTCACAAAGTTGCGATTGATACAATTATTCATCTACGAGATCGACAACAACTT
ATGTCGTATTTGGATCAAATTCCACAATCCAACCAACATATGCGGCAATATCTGACCAAC
AATGTTAGGTCACAGGAAATTAAATGGAGAAACTGAGAAGTGTTCGTGCAATAAAACTTT
AAAAAAAAGAATTTTATTCGAATTTTTTGGGGCGGCTTTTGTATCCTTGCATTCATTCAA
TAAAAACGTGATTGAATTTCCAAGCAGCAGCAAACGTGATGTATATTACCGCAGTCAGTT
TGCCCATGCAGGCATGTTTGTTTTAAACTCCCAATCTGGCCCTTTGTAACTGAGCGCATG
CAAATAAATAAACAAGGATTG

InterProScan

Gene3D
Vps16_C_sf (IPR038132) - T[165-452] 1.1E-13
Pfam
Vps16_C (IPR006925) - T[361-482] 9.9E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPE39_HUMAN 30.845 % 235 1.6E-71