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TRANSCRIPT CARD

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  1. EST 'AHC0AAA226YK03_RM1'
  2. EST 'AHC0AAA223YP15_RM1'
  3. Transcript 'Moocci.CG.ELv1_2.S16...'
  4. Transcript 'Phmamm.CG.MTP2014.S9...'
  5. Transcript 'KH2012:KH.S966.3.v1....'

Transcript Model

Transcript Id

KH2012:KH.S966.3.v1.A.nonSL6-1

Possible name(s)

VIPAS39

Location

KhS966 [11,458 / 14,491]

Sequences

Amino acid sequence

Length: 499

>KH.S966.3.v1.A.nonSL6-1
MASARKKTTATVSDEVYWNSSVLSPFNFNDDEENEDSIDVITWDGTNTSVSSKSQPNIKS
QPTASVHGTQATAPVHGTHVTSARYTPRKAYNSTTTKLDQPRPTPDTRSITDVVNDKKNS
PTTTDIVKLESEVATLRRQLTQAKRDRAVAPSKSDTLRRIMVGEACLLELYKSKEDKCSL
LDAAIERFDGNAIVAATLFMRDTLKRDLFSKELMRRGAAVDHYCAYLRAAGEVDELHETL
SAIGLTEEAAVLKYRQCLTNTSSTTPEIRASGLKDCIKYYFDSDIRLANETSAIQEQISL
MRRQSVVDDGDKASQASGQVPVFKSHPRKECITHKSVVTTLYYFCYYHWGEAEGLLSSPT
SLRNEHKIAEKQFVFTAIAALCKMRRWRDLENLLTTPRTLFRNSRLHANIGFDKVVDVLS
KNLAPPDALAKYCAEVESVDKRLELSVRLKCHKVAIDTIIHLRDRQQLMSYLDQIPQSNQ
HMRQYLTNNVRSQEIKWRN

Nucleotide sequence

Length: 1,783

>KH2012:KH.S966.3.v1.A.nonSL6-1
AGAAATAGTATACGATATGTTTGTTGTTGTGAAAATTTAAAGTTGGTTGTTGAATTAAAT
GGCTTCGGCGAGGAAAAAGACGACAGCAACAGTTAGCGATGAAGTTTATTGGAACAGCAG
TGTTTTGTCTCCGTTTAATTTCAACGACGATGAAGAGAATGAAGATAGCATCGATGTTAT
AACATGGGATGGAACGAACACTTCTGTTAGCTCCAAGTCACAACCCAATATTAAAAGCCA
ACCAACGGCCTCGGTTCATGGCACACAGGCTACGGCACCAGTCCATGGCACGCATGTCAC
ATCAGCGCGGTACACACCACGTAAAGCTTACAACTCAACGACAACGAAACTCGACCAACC
ACGACCAACGCCGGATACTCGTTCAATTACGGATGTTGTAAACGACAAGAAGAACAGCCC
AACGACAACGGACATCGTTAAACTTGAGTCGGAGGTTGCAACTTTGCGGCGACAATTGAC
ACAAGCAAAACGTGATCGTGCCGTGGCGCCTTCAAAGTCGGACACTTTACGCAGAATAAT
GGTTGGTGAAGCTTGTTTATTGGAGTTGTACAAATCCAAGGAGGATAAATGTTCGTTACT
CGATGCTGCCATTGAGCGTTTTGATGGGAACGCGATTGTTGCTGCCACGTTGTTTATGAG
AGACACTTTAAAAAGAGATTTATTTAGCAAGGAATTAATGCGTCGAGGTGCAGCGGTGGA
TCACTACTGCGCTTATCTACGAGCAGCTGGGGAAGTTGATGAATTGCACGAAACATTGAG
CGCTATCGGGCTCACAGAGGAAGCTGCCGTGTTAAAGTATCGCCAATGTTTAACCAATAC
GTCGTCAACCACACCTGAGATTCGTGCATCAGGTCTCAAGGACTGCATCAAATATTATTT
TGACTCTGACATCCGGTTGGCAAACGAAACGTCTGCAATTCAGGAACAAATCTCGTTAAT
GCGACGACAATCTGTTGTTGATGATGGGGACAAAGCATCACAAGCTAGTGGTCAAGTACC
CGTGTTCAAGTCCCACCCAAGAAAGGAATGCATCACCCATAAATCTGTCGTCACAACTTT
GTATTACTTCTGTTACTACCACTGGGGTGAAGCAGAGGGTTTACTGAGCAGTCCAACTTC
ATTGAGGAACGAACACAAAATCGCGGAAAAACAATTTGTTTTCACAGCGATCGCTGCGCT
TTGTAAAATGAGAAGGTGGAGGGATTTGGAAAACCTTCTTACGACGCCGCGAACGTTGTT
CAGGAATTCTCGGCTTCACGCGAACATTGGGTTTGATAAAGTGGTTGACGTGTTGAGCAA
GAACCTTGCGCCCCCTGATGCGTTGGCGAAATATTGTGCTGAGGTTGAAAGCGTGGACAA
GAGGTTGGAGCTGTCGGTTCGATTAAAATGTCACAAAGTTGCGATTGATACAATTATTCA
TCTACGAGATCGACAACAACTTATGTCGTATTTGGATCAAATTCCACAATCCAACCAACA
TATGCGGCAATATCTGACCAACAATGTTAGGTCACAGGAAATTAAATGGAGAAACTGAGA
AGTGTTCGTGCAATAAAACTTTAAAAAAAAGAATTTTATTCGAATTTTTTGGGGCGGCTT
TTGTATCCTTGCATTCATTCAATAAAAACGTGATTGAATTTCCAAGCAGCAGCAAACGTG
ATGTATATTACCGCAGTCAGTTTGCCCATGCAGGCATGTTTGTTTTAAACTCCCAATCTG
GCCCTTTGTAACTGAGCGCATGCAAATAAATAAACAAGGATTG

InterProScan

Gene3D
Vps16_C_sf (IPR038132) - T[165-452] 1.1E-13
Pfam
Vps16_C (IPR006925) - T[361-482] 9.9E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPE39_HUMAN 30.845 % 235 1.6E-71