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  1. Transcript 'KH2012:KH.C5.61.v4.A...' > 
  2. Transcript 'KH2012:KH.C5.380.v1....' > 
  3. Transcript 'KH2012:KH.L170.78.v1...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  5. Transcript 'KH2012:KH.S966.3.v1....'

Transcript Model

Transcript Id

KH2012:KH.S966.3.v1.A.nonSL7-1

Possible name(s)

VIPAS39

Gene model

KH2012:KH.S966.3

Location

KhS966 [11,458 / 14,493]

Sequences

Amino acid sequence

Length: 499

>KH.S966.3.v1.A.nonSL7-1
MASARKKTTATVSDEVYWNSSVLSPFNFNDDEENEDSIDVITWDGTNTSVSSKSQPNIKS
QPTASVHGTQATAPVHGTHVTSARYTPRKAYNSTTTKLDQPRPTPDTRSITDVVNDKKNS
PTTTDIVKLESEVATLRRQLTQAKRDRAVAPSKSDTLRRIMVGEACLLELYKSKEDKCSL
LDAAIERFDGNAIVAATLFMRDTLKRDLFSKELMRRGAAVDHYCAYLRAAGEVDELHETL
SAIGLTEEAAVLKYRQCLTNTSSTTPEIRASGLKDCIKYYFDSDIRLANETSAIQEQISL
MRRQSVVDDGDKASQASGQVPVFKSHPRKECITHKSVVTTLYYFCYYHWGEAEGLLSSPT
SLRNEHKIAEKQFVFTAIAALCKMRRWRDLENLLTTPRTLFRNSRLHANIGFDKVVDVLS
KNLAPPDALAKYCAEVESVDKRLELSVRLKCHKVAIDTIIHLRDRQQLMSYLDQIPQSNQ
HMRQYLTNNVRSQEIKWRN

Nucleotide sequence

Length: 1,785

>KH2012:KH.S966.3.v1.A.nonSL7-1
ATAGAAATAGTATACGATATGTTTGTTGTTGTGAAAATTTAAAGTTGGTTGTTGAATTAA
ATGGCTTCGGCGAGGAAAAAGACGACAGCAACAGTTAGCGATGAAGTTTATTGGAACAGC
AGTGTTTTGTCTCCGTTTAATTTCAACGACGATGAAGAGAATGAAGATAGCATCGATGTT
ATAACATGGGATGGAACGAACACTTCTGTTAGCTCCAAGTCACAACCCAATATTAAAAGC
CAACCAACGGCCTCGGTTCATGGCACACAGGCTACGGCACCAGTCCATGGCACGCATGTC
ACATCAGCGCGGTACACACCACGTAAAGCTTACAACTCAACGACAACGAAACTCGACCAA
CCACGACCAACGCCGGATACTCGTTCAATTACGGATGTTGTAAACGACAAGAAGAACAGC
CCAACGACAACGGACATCGTTAAACTTGAGTCGGAGGTTGCAACTTTGCGGCGACAATTG
ACACAAGCAAAACGTGATCGTGCCGTGGCGCCTTCAAAGTCGGACACTTTACGCAGAATA
ATGGTTGGTGAAGCTTGTTTATTGGAGTTGTACAAATCCAAGGAGGATAAATGTTCGTTA
CTCGATGCTGCCATTGAGCGTTTTGATGGGAACGCGATTGTTGCTGCCACGTTGTTTATG
AGAGACACTTTAAAAAGAGATTTATTTAGCAAGGAATTAATGCGTCGAGGTGCAGCGGTG
GATCACTACTGCGCTTATCTACGAGCAGCTGGGGAAGTTGATGAATTGCACGAAACATTG
AGCGCTATCGGGCTCACAGAGGAAGCTGCCGTGTTAAAGTATCGCCAATGTTTAACCAAT
ACGTCGTCAACCACACCTGAGATTCGTGCATCAGGTCTCAAGGACTGCATCAAATATTAT
TTTGACTCTGACATCCGGTTGGCAAACGAAACGTCTGCAATTCAGGAACAAATCTCGTTA
ATGCGACGACAATCTGTTGTTGATGATGGGGACAAAGCATCACAAGCTAGTGGTCAAGTA
CCCGTGTTCAAGTCCCACCCAAGAAAGGAATGCATCACCCATAAATCTGTCGTCACAACT
TTGTATTACTTCTGTTACTACCACTGGGGTGAAGCAGAGGGTTTACTGAGCAGTCCAACT
TCATTGAGGAACGAACACAAAATCGCGGAAAAACAATTTGTTTTCACAGCGATCGCTGCG
CTTTGTAAAATGAGAAGGTGGAGGGATTTGGAAAACCTTCTTACGACGCCGCGAACGTTG
TTCAGGAATTCTCGGCTTCACGCGAACATTGGGTTTGATAAAGTGGTTGACGTGTTGAGC
AAGAACCTTGCGCCCCCTGATGCGTTGGCGAAATATTGTGCTGAGGTTGAAAGCGTGGAC
AAGAGGTTGGAGCTGTCGGTTCGATTAAAATGTCACAAAGTTGCGATTGATACAATTATT
CATCTACGAGATCGACAACAACTTATGTCGTATTTGGATCAAATTCCACAATCCAACCAA
CATATGCGGCAATATCTGACCAACAATGTTAGGTCACAGGAAATTAAATGGAGAAACTGA
GAAGTGTTCGTGCAATAAAACTTTAAAAAAAAGAATTTTATTCGAATTTTTTGGGGCGGC
TTTTGTATCCTTGCATTCATTCAATAAAAACGTGATTGAATTTCCAAGCAGCAGCAAACG
TGATGTATATTACCGCAGTCAGTTTGCCCATGCAGGCATGTTTGTTTTAAACTCCCAATC
TGGCCCTTTGTAACTGAGCGCATGCAAATAAATAAACAAGGATTG

InterProScan

Gene3D
Vps16_C_sf (IPR038132) - T[165-452] 1.1E-13
Pfam
Vps16_C (IPR006925) - T[361-482] 9.9E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPE39_HUMAN 30.845 % 235 1.6E-71