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  1. Transcript 'KH2012:KH.S966.3.v1....'

Transcript Model

Transcript Id

KH2012:KH.S966.3.v1.R.ND1-1

Possible name(s)

VIPAS39

Location

KhS966 [11,458 / 14,490]

Sequences

Amino acid sequence

Length: 499

>KH.S966.3.v1.R.ND1-1
MASARKKTTATVSDEVYWNSSVLSPFNFNDDEENEDSIDVITWDGTNTSVSSKSQPNIKS
QPTASVHGTQATAPVHGTHVTSARYTPRKAYNSTTTKLDQPRPTPDTRSITDVVNDKKNS
PTTTDIVKLESEVATLRRQLTQAKRDRAVAPSKSDTLRRIMVGEACLLELYKSKEDKCSL
LDAAIERFDGNAIVAATLFMRDTLKRDLFSKELMRRGAAVDHYCAYLRAAGEVDELHETL
SAIGLTEEAAVLKYRQCLTNTSSTTPEIRASGLKDCIKYYFDSDIRLANETSAIQEQISL
MRRQSVVDDGDKASQASGQVPVFKSHPRKECITHKSVVTTLYYFCYYHWGEAEGLLSSPT
SLRNEHKIAEKQFVFTAIAALCKMRRWRDLENLLTTPRTLFRNSRLHANIGFDKVVDVLS
KNLAPPDALAKYCAEVESVDKRLELSVRLKCHKVAIDTIIHLRDRQQLMSYLDQIPQSNQ
HMRQYLTNNVRSQEIKWRN

Nucleotide sequence

Length: 1,782

>KH2012:KH.S966.3.v1.R.ND1-1
GAAATAGTATACGATATGTTTGTTGTTGTGAAAATTTAAAGTTGGTTGTTGAATTAAATG
GCTTCGGCGAGGAAAAAGACGACAGCAACAGTTAGCGATGAAGTTTATTGGAACAGCAGT
GTTTTGTCTCCGTTTAATTTCAACGACGATGAAGAGAATGAAGATAGCATCGATGTTATA
ACATGGGATGGAACGAACACTTCTGTTAGCTCCAAGTCACAACCCAATATTAAAAGCCAA
CCAACGGCCTCGGTTCATGGCACACAGGCTACGGCACCAGTCCATGGCACGCATGTCACA
TCAGCGCGGTACACACCACGTAAAGCTTACAACTCAACGACAACGAAACTCGACCAACCA
CGACCAACGCCGGATACTCGTTCAATTACGGATGTTGTAAACGACAAGAAGAACAGCCCA
ACGACAACGGACATCGTTAAACTTGAGTCGGAGGTTGCAACTTTGCGGCGACAATTGACA
CAAGCAAAACGTGATCGTGCCGTGGCGCCTTCAAAGTCGGACACTTTACGCAGAATAATG
GTTGGTGAAGCTTGTTTATTGGAGTTGTACAAATCCAAGGAGGATAAATGTTCGTTACTC
GATGCTGCCATTGAGCGTTTTGATGGGAACGCGATTGTTGCTGCCACGTTGTTTATGAGA
GACACTTTAAAAAGAGATTTATTTAGCAAGGAATTAATGCGTCGAGGTGCAGCGGTGGAT
CACTACTGCGCTTATCTACGAGCAGCTGGGGAAGTTGATGAATTGCACGAAACATTGAGC
GCTATCGGGCTCACAGAGGAAGCTGCCGTGTTAAAGTATCGCCAATGTTTAACCAATACG
TCGTCAACCACACCTGAGATTCGTGCATCAGGTCTCAAGGACTGCATCAAATATTATTTT
GACTCTGACATCCGGTTGGCAAACGAAACGTCTGCAATTCAGGAACAAATCTCGTTAATG
CGACGACAATCTGTTGTTGATGATGGGGACAAAGCATCACAAGCTAGTGGTCAAGTACCC
GTGTTCAAGTCCCACCCAAGAAAGGAATGCATCACCCATAAATCTGTCGTCACAACTTTG
TATTACTTCTGTTACTACCACTGGGGTGAAGCAGAGGGTTTACTGAGCAGTCCAACTTCA
TTGAGGAACGAACACAAAATCGCGGAAAAACAATTTGTTTTCACAGCGATCGCTGCGCTT
TGTAAAATGAGAAGGTGGAGGGATTTGGAAAACCTTCTTACGACGCCGCGAACGTTGTTC
AGGAATTCTCGGCTTCACGCGAACATTGGGTTTGATAAAGTGGTTGACGTGTTGAGCAAG
AACCTTGCGCCCCCTGATGCGTTGGCGAAATATTGTGCTGAGGTTGAAAGCGTGGACAAG
AGGTTGGAGCTGTCGGTTCGATTAAAATGTCACAAAGTTGCGATTGATACAATTATTCAT
CTACGAGATCGACAACAACTTATGTCGTATTTGGATCAAATTCCACAATCCAACCAACAT
ATGCGGCAATATCTGACCAACAATGTTAGGTCACAGGAAATTAAATGGAGAAACTGAGAA
GTGTTCGTGCAATAAAACTTTAAAAAAAAGAATTTTATTCGAATTTTTTGGGGCGGCTTT
TGTATCCTTGCATTCATTCAATAAAAACGTGATTGAATTTCCAAGCAGCAGCAAACGTGA
TGTATATTACCGCAGTCAGTTTGCCCATGCAGGCATGTTTGTTTTAAACTCCCAATCTGG
CCCTTTGTAACTGAGCGCATGCAAATAAATAAACAAGGATTG

InterProScan

Gene3D
Vps16_C_sf (IPR038132) - T[165-452] 1.1E-13
Pfam
Vps16_C (IPR006925) - T[361-482] 9.9E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPE39_HUMAN 30.845 % 235 1.6E-71