Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.S966.3.v2....'

Transcript Model

Transcript Id

KH2012:KH.S966.3.v2.A.SL2-1

Possible name(s)

VIPAS39

Location

KhS966 [11,458 / 14,167]

Sequences

Amino acid sequence

Length: 492

>KH.S966.3.v2.A.SL2-1
TTATVSDEVYWNSSVLSPFNFNDDEENEDSIDVITWDGTNTSVSSKSQPNIKSQPTASVH
GTQATAPVHGTHVTSARYTPRKAYNSTTTKLDQPRPTPDTRSITDVVNDKKNSPTTTDIV
KLESEVATLRRQLTQAKRDRAVAPSKSDTLRRIMVGEACLLELYKSKEDKCSLLDAAIER
FDGNAIVAATLFMRDTLKRDLFSKELMRRGAAVDHYCAYLRAAGEVDELHETLSAIGLTE
EAAVLKYRQCLTNTSSTTPEIRASGLKDCIKYYFDSDIRLANETSAIQEQISLMRRQSVV
DDGDKASQASGQVPVFKSHPRKECITHKSVVTTLYYFCYYHWGEAEGLLSSPTSLRNEHK
IAEKQFVFTAIAALCKMRRWRDLENLLTTPRTLFRNSRLHANIGFDKVVDVLSKNLAPPD
ALAKYCAEVESVDKRLELSVRLKCHKVAIDTIIHLRDRQQLMSYLDQIPQSNQHMRQYLT
NNVRSQEIKWRN

Nucleotide sequence

Length: 1,704

>KH2012:KH.S966.3.v2.A.SL2-1
ACGACAGCAACAGTTAGCGATGAAGTTTATTGGAACAGCAGTGTTTTGTCTCCGTTTAAT
TTCAACGACGATGAAGAGAATGAAGATAGCATCGATGTTATAACATGGGATGGAACGAAC
ACTTCTGTTAGCTCCAAGTCACAACCCAATATTAAAAGCCAACCAACGGCCTCGGTTCAT
GGCACACAGGCTACGGCACCAGTCCATGGCACGCATGTCACATCAGCGCGGTACACACCA
CGTAAAGCTTACAACTCAACGACAACGAAACTCGACCAACCACGACCAACGCCGGATACT
CGTTCAATTACGGATGTTGTAAACGACAAGAAGAACAGCCCAACGACAACGGACATCGTT
AAACTTGAGTCGGAGGTTGCAACTTTGCGGCGACAATTGACACAAGCAAAACGTGATCGT
GCCGTGGCGCCTTCAAAGTCGGACACTTTACGCAGAATAATGGTTGGTGAAGCTTGTTTA
TTGGAGTTGTACAAATCCAAGGAGGATAAATGTTCGTTACTCGATGCTGCCATTGAGCGT
TTTGATGGGAACGCGATTGTTGCTGCCACGTTGTTTATGAGAGACACTTTAAAAAGAGAT
TTATTTAGCAAGGAATTAATGCGTCGAGGTGCAGCGGTGGATCACTACTGCGCTTATCTA
CGAGCAGCTGGGGAAGTTGATGAATTGCACGAAACATTGAGCGCTATCGGGCTCACAGAG
GAAGCTGCCGTGTTAAAGTATCGCCAATGTTTAACCAATACGTCGTCAACCACACCTGAG
ATTCGTGCATCAGGTCTCAAGGACTGCATCAAATATTATTTTGACTCTGACATCCGGTTG
GCAAACGAAACGTCTGCAATTCAGGAACAAATCTCGTTAATGCGACGACAATCTGTTGTT
GATGATGGGGACAAAGCATCACAAGCTAGTGGTCAAGTACCCGTGTTCAAGTCCCACCCA
AGAAAGGAATGCATCACCCATAAATCTGTCGTCACAACTTTGTATTACTTCTGTTACTAC
CACTGGGGTGAAGCAGAGGGTTTACTGAGCAGTCCAACTTCATTGAGGAACGAACACAAA
ATCGCGGAAAAACAATTTGTTTTCACAGCGATCGCTGCGCTTTGTAAAATGAGAAGGTGG
AGGGATTTGGAAAACCTTCTTACGACGCCGCGAACGTTGTTCAGGAATTCTCGGCTTCAC
GCGAACATTGGGTTTGATAAAGTGGTTGACGTGTTGAGCAAGAACCTTGCGCCCCCTGAT
GCGTTGGCGAAATATTGTGCTGAGGTTGAAAGCGTGGACAAGAGGTTGGAGCTGTCGGTT
CGATTAAAATGTCACAAAGTTGCGATTGATACAATTATTCATCTACGAGATCGACAACAA
CTTATGTCGTATTTGGATCAAATTCCACAATCCAACCAACATATGCGGCAATATCTGACC
AACAATGTTAGGTCACAGGAAATTAAATGGAGAAACTGAGAAGTGTTCGTGCAATAAAAC
TTTAAAAAAAAGAATTTTATTCGAATTTTTTGGGGCGGCTTTTGTATCCTTGCATTCATT
CAATAAAAACGTGATTGAATTTCCAAGCAGCAGCAAACGTGATGTATATTACCGCAGTCA
GTTTGCCCATGCAGGCATGTTTGTTTTAAACTCCCAATCTGGCCCTTTGTAACTGAGCGC
ATGCAAATAAATAAACAAGGATTG

InterProScan

Gene3D
Vps16_C_sf (IPR038132) - T[159-445] 1.1E-13
Pfam
Vps16_C (IPR006925) - T[354-475] 9.7E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPE39_HUMAN 30.845 % 236 7.12E-72