Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C10.310.v1.A.nonSL3-1

Possible name(s)

NDUFS4

Gene model

KH2012:KH.C10.310

Location

KhC10 [3,717,749 / 3,718,498]

Sequences

Amino acid sequence

Length: 172

>KH.C10.310.v1.A.nonSL3-1
SCMNIRVHLPGSVVTTIASHKLEKDKTSRKDRKVEVEDTKTQAVQLRITDATAHDVSVVT
GAPEEHAVTRKVRIFRPAKNAMQSGNVNTKKWKVEPETRERWENPTMGWSSSADPLSNIS
MALSFNSKDDAISFVERQGWSWFVDEAKEKKMQPKSYAANFSWDKRTRRAMK

Nucleotide sequence

Length: 749

>KH2012:KH.C10.310.v1.A.nonSL3-1
TCATGTATGAACATCAGAGTTCATTTACCTGGCTCCGTGGTTACCACTATTGCCTCCCAC
AAGCTTGAAAAAGATAAGACAAGTCGAAAAGACAGAAAAGTTGAGGTCGAAGACACAAAA
ACTCAGGCGGTCCAACTCCGGATCACAGATGCCACTGCGCATGATGTTTCCGTGGTAACA
GGAGCTCCGGAAGAGCACGCTGTAACCCGTAAAGTGAGGATCTTCCGCCCTGCAAAGAAC
GCCATGCAGTCCGGAAACGTAAACACCAAGAAATGGAAAGTGGAACCAGAAACTCGTGAG
CGGTGGGAAAACCCAACGATGGGTTGGTCATCTTCTGCTGATCCTCTTTCCAATATCTCC
ATGGCTCTCTCCTTCAACTCCAAAGATGATGCAATCAGCTTTGTCGAGAGGCAAGGTTGG
AGTTGGTTTGTAGACGAAGCAAAGGAGAAGAAAATGCAGCCAAAGTCGTATGCTGCGAAC
TTTTCCTGGGACAAACGCACCCGAAGAGCCATGAAATAATTTTGTTGTTATTTTCTCTTT
GACTATAAAAATCTTTATTGTTTGGAATATTTAATGCTTTTCTTTTACTGGTTGAGACAG
AATTTACTTTACAAGTTAGCAGAAATCCTAATATTTGATTTTCCCCGAAATATTGGTTCT
AAATTGTTGATTTTTATTCATTGGTCAAATTGTAAATTTAGCTCACTGATATTCACTACC
ACAAATTTTCATTGTATCAACTGTATTAG

InterProScan

PANTHER	NADH_UbQ_FeS_4_mit (IPR006885) - T[28-171] 9.4E-52
Gene3D	NDUFS4-like_sf (IPR038532) - T[67-150] 1.1E-29
Pfam	NADH_UbQ_FeS_4_mit (IPR006885) - T[71-166] 2.5E-36

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NDUS4_HUMAN	60.15 %	159	3.79E-50