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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'
  2. Transcript 'KH2012:KH.C5.23.v5.A...'
  3. Transcript 'KH2012:KH.L57.5.v1.R...'
  4. Transcript 'KH2012:KH.C10.43.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.43.v1.A.nonSL3-1

Possible name(s)

COX6A1; COX6A2

Location

KhC10 [4,476,353 / 4,477,488]

Sequences

Amino acid sequence

Length: 100

>KH.C10.43.v1.A.nonSL3-1
TYTKLVTFVKNRIPVALIITLPFTELMRILSLTVVPFSIIAVGVNAYMIEVEHGKHAPPE
YKEYAHIGIMTKKYPWGDGKHTLFHNPRSQGIKGKGYDEQ

Nucleotide sequence

Length: 769

>KH2012:KH.C10.43.v1.A.nonSL3-1
AATCTTCAGACGTTAGTTTCGAAAGTGCCCAGAAAACTATGAGTGAGTTTGCATGTTTAA
ATTTATAGAAATGCTTAGTATGTTTATTGTGTTTGGTGTATGAAGTTTTCACATTATTTG
TTTGAGTTTGTCATCATGTTTTACTTGGCTTTTACATTATTTGAGGTAGCAAAATCCAAC
AAAAGCAGAGATTGCAGATTTTTGTAAGAATTTGAAAAACAGAGAAATGAGAGTAAAGCT
CATGTTAATTATACAGTTAATATTTTAATATTAATACTCCCCTGGTATTTTTCGTAATAA
ACATATACAAAATTGGTAACTTTTGTCAAAAACAGAATTCCAGTTGCCTTAATAATAACT
TTACCTTTTACAGAACTGATGCGCATTCTCTCCTTAACTGTGGTCCCATTTTCCATTATT
GCTGTTGGTGTGAATGCCTACATGATTGAGGTGGAACATGGGAAACATGCTCCACCAGAG
TACAAGGAATATGCCCACATTGGTATTATGACAAAGAAATACCCATGGGGTGATGGTAAA
CATACACTATTCCATAACCCAAGAAGCCAAGGCATCAAAGGAAAAGGTTATGATGAGCAA
TAAAGACATTCTTTTCAGTTCATTGTTTTCGTGGAGTTCAAATTAATATTGGATGACTAA
CATGATTTGGCTTGGTTCTTTGTGTTTCTGTCATAAATAAATATACACTTATTGAAAAGT
TTTCTCCCGCTTAATTGTGAGGTAATTCATGTTTTTGGTAACAGAGTAA

InterProScan

Gene3D
Cyt_c_oxidase_su6a_sf (IPR036418) - T[22-100] 8.6E-20
PANTHER
Cyt_c_oxidase_su6a (IPR001349) - T[24-97] 2.8E-21
SUPERFAMILY
Cyt_c_oxidase_su6a_sf (IPR036418) - T[24-89] 1.01E-15
Pfam
Cyt_c_oxidase_su6a (IPR001349) - T[24-87] 2.9E-14
ProDom
Cyt_c_oxidase_su6a (IPR001349) - T[28-98] 5.0E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value