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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Region 'REG00001473'
  3. Transcript 'KH2012:KH.C6.244.v1....'
  4. EST 'AHC0AAA223YD15_RM1'
  5. Transcript 'KH2012:KH.C10.43.v2....'

Transcript Model

Transcript Id

KH2012:KH.C10.43.v2.A.nonSL10-1

Possible name(s)

COX6A1; COX6A2

Location

KhC10 [4,476,353 / 4,477,539]

Sequences

Amino acid sequence

Length: 106

>KH.C10.43.v2.A.nonSL10-1
FLLRSHLTRFALRNVRQSSDVSFESAQKTMKLMRILSLTVVPFSIIAVGVNAYMIEVEHG
KHAPPEYKEYAHIGIMTKKYPWGDGKHTLFHNPRSQGIKGKGYDEQ

Nucleotide sequence

Length: 489

>KH2012:KH.C10.43.v2.A.nonSL10-1
CTTTTCTTCTGAGATCCCACCTGACAAGGTTTGCTTTGAGAAATGTCCGGCAATCTTCAG
ACGTTAGTTTCGAAAGTGCCCAGAAAACTATGAAACTGATGCGCATTCTCTCCTTAACTG
TGGTCCCATTTTCCATTATTGCTGTTGGTGTGAATGCCTACATGATTGAGGTGGAACATG
GGAAACATGCTCCACCAGAGTACAAGGAATATGCCCACATTGGTATTATGACAAAGAAAT
ACCCATGGGGTGATGGTAAACATACACTATTCCATAACCCAAGAAGCCAAGGCATCAAAG
GAAAAGGTTATGATGAGCAATAAAGACATTCTTTTCAGTTCATTGTTTTCGTGGAGTTCA
AATTAATATTGGATGACTAACATGATTTGGCTTGGTTCTTTGTGTTTCTGTCATAAATAA
ATATACACTTATTGAAAAGTTTTCTCCCGCTTAATTGTGAGGTAATTCATGTTTTTGGTA
ACAGAGTAA

InterProScan

PANTHER
Cyt_c_oxidase_su6a (IPR001349) - T[15-103] 5.4E-24
Gene3D
Cyt_c_oxidase_su6a_sf (IPR036418) - T[19-106] 2.4E-21
Pfam
Cyt_c_oxidase_su6a (IPR001349) - T[23-93] 2.3E-15
SUPERFAMILY
Cyt_c_oxidase_su6a_sf (IPR036418) - T[24-95] 1.7E-16
ProDom
Cyt_c_oxidase_su6a (IPR001349) - T[29-104] 2.0E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value