- Transcript 'KH2012:KH.C1.1039.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1039.v1.A.nonSL5-1
Possible name(s)
HGFAC; PRSS12; TMPRSS3
Gene model
Location
KhC1 [696,175 / 701,846]
Amino acid sequence
Length: 869
>KH.C1.1039.v1.A.nonSL5-1
NMGVTKLWMVVLLLWLVCDVIYAGRQQGRGRQRNRENRRGGRGRRPPNVGRGPPTSGSRS
TVDDIFSLFFGEDTSFSFSHTGNSFLWSIGGPTPTTPVAPTTPATPATTTTTTAASTATN
DDITMNLPWRGKGSFTGDVRIDCRNKRGGCYKGGVQVFNREEGRWGNVCGAGWGKMDANV
VCKYLKYKKGAKKHLRLRKAKLSVVGKRLSPMLRNIRCTGGEAKLTECDGEAMRDGEGCE
GERFAGVVCQGKQTILEDDVTCSSSETRCANRKTCVTSQHVCDGTSDCPWGSDEENCGTT
GVCDVDKFWCGAGGGGCVSRSFVCDGDRDCVNGTDEIGCVQYLRQFTWLRNAKLQLTAGD
YNSGWRHVTPYTCAKKCREEKRFDCVSFDYHKDTKECDLTTHSSRNARLVRPREGNWDHY
ELKTPRRCPGFRCVTSWSCIPASQQCDGEVQCRDGSDERNCSDVGGGFTIRLASGVSSYE
GHLEVKRAGEDFGLVCDIGWSMNEANVACRQLGFRGALMALSGQFFQRSHRAYMLSDVTC
RGDEVTIDECRHSGWGVKDCPMDHEAGVVCIFGDVAIPTTTPTTTTTRGTTTAQRITTTA
TPRRTTATPPRCGVKPSTENHAIPRIVGGNFAQPNEWPWQVAIWLPWQFKCGGTLIDSCW
VLTAAHCFSQQYDVSNYWIRLGDHQSTVVDGTEQDFKIERIIKHNFNTNTNDNDIALIEL
KRHNGRCARLNEVVKLACLPTSLNQFPGGTKCHIVGWGQTSFESATPYTRLLKEATIPLI
SRRDCLAQSVYGTRLSTNMFCAGYIRGGVDTCQGDSGGPLLCQANDGLYYVWGVVSWGNG
CAQPRSPGVYTNVANYVGWITRNTGITF+
Nucleotide sequence
Length: 2,605
>KH2012:KH.C1.1039.v1.A.nonSL5-1
AAACATGGGTGTTACGAAACTATGGATGGTTGTGTTGCTATTGTGGTTGGTTTGTGATGT
CATATATGCAGGGAGGCAGCAAGGAAGAGGCAGACAAAGAAACCGTGAGAATAGACGTGG
AGGTCGAGGAAGGCGACCGCCAAATGTGGGGAGGGGTCCGCCAACAAGCGGCAGTCGATC
AACAGTAGATGATATATTTTCTTTGTTCTTCGGTGAAGATACTTCTTTCAGTTTCTCACA
TACGGGGAATTCCTTTCTATGGAGCATAGGTGGACCCACCCCAACAACCCCTGTTGCCCC
TACCACCCCCGCAACCCCCGCAACAACAACAACAACAACTGCCGCGTCCACAGCGACCAA
TGATGACATAACAATGAACCTACCATGGCGGGGCAAAGGAAGCTTTACGGGCGATGTTCG
CATTGATTGTCGGAATAAGAGGGGTGGTTGTTACAAGGGTGGTGTTCAAGTATTTAACAG
GGAGGAGGGTCGGTGGGGGAACGTGTGTGGGGCGGGGTGGGGTAAGATGGATGCTAACGT
CGTGTGTAAATACCTCAAGTATAAGAAAGGAGCAAAGAAACATCTTCGGCTTCGCAAAGC
AAAGTTGTCAGTTGTTGGGAAAAGGTTATCACCGATGTTACGAAACATACGGTGTACGGG
CGGTGAGGCGAAGTTAACCGAGTGTGACGGTGAAGCCATGCGTGACGGAGAGGGTTGTGA
GGGGGAAAGATTCGCTGGGGTTGTTTGCCAGGGAAAACAAACGATCCTTGAAGATGACGT
CACGTGCTCGAGTTCCGAAACACGATGCGCGAATCGTAAGACGTGTGTTACGTCACAACA
CGTATGCGATGGGACGAGTGATTGTCCTTGGGGTAGCGATGAAGAGAACTGTGGAACAAC
TGGTGTTTGTGACGTGGATAAGTTCTGGTGTGGGGCCGGGGGAGGGGGGTGTGTTAGTCG
AAGCTTTGTTTGCGATGGAGACAGAGATTGTGTGAACGGGACGGATGAGATTGGGTGTGT
GCAATACCTGCGTCAGTTTACATGGCTACGAAACGCCAAGCTCCAATTAACCGCTGGTGA
CTACAACTCGGGTTGGCGCCATGTTACTCCATATACTTGTGCGAAGAAATGTAGAGAAGA
AAAACGATTTGACTGCGTGTCGTTCGATTATCATAAGGATACAAAGGAGTGTGACCTCAC
AACGCATTCGAGTAGAAACGCTCGCTTGGTGCGCCCGAGAGAAGGGAACTGGGATCATTA
TGAACTTAAGACGCCTAGGAGGTGTCCTGGGTTTCGATGTGTTACGTCATGGTCGTGTAT
ACCAGCATCCCAACAATGTGATGGAGAGGTTCAATGTAGGGACGGGTCGGATGAAAGAAA
CTGCAGTGACGTAGGAGGAGGATTTACCATCCGTCTGGCATCGGGGGTTTCCTCATATGA
GGGTCATCTGGAGGTCAAGCGGGCTGGGGAGGACTTTGGGCTCGTGTGCGACATCGGGTG
GTCGATGAATGAAGCGAACGTCGCGTGTAGACAATTGGGATTCAGAGGTGCATTGATGGC
GCTAAGTGGTCAATTCTTTCAACGAAGTCATCGCGCGTATATGCTTAGTGACGTCACATG
CAGGGGTGATGAGGTCACTATAGATGAATGTCGTCATAGTGGGTGGGGGGTAAAAGATTG
CCCAATGGACCATGAAGCTGGGGTGGTTTGTATATTTGGTGACGTTGCTATTCCTACAAC
GACGCCAACAACAACAACTACACGTGGAACAACTACAGCACAAAGAATAACAACAACAGC
GACGCCACGACGTACAACAGCCACGCCACCAAGATGTGGCGTGAAGCCATCCACCGAAAA
CCACGCCATACCGCGTATAGTGGGTGGCAACTTTGCTCAACCCAATGAATGGCCATGGCA
GGTAGCAATTTGGTTACCTTGGCAATTCAAATGTGGAGGGACTTTGATTGACAGTTGTTG
GGTGTTGACGGCGGCTCACTGCTTCTCACAGCAGTATGACGTCAGTAACTACTGGATACG
CTTGGGTGACCACCAATCAACGGTCGTAGATGGCACAGAACAGGATTTCAAAATTGAAAG
AATAATTAAACATAATTTCAACACAAACACAAACGACAACGACATTGCTTTGATTGAGTT
GAAACGTCATAACGGCAGATGTGCTCGACTCAACGAAGTTGTGAAACTAGCTTGTCTACC
AACGTCGTTGAACCAGTTTCCTGGTGGAACAAAATGTCATATAGTTGGTTGGGGACAAAC
GTCATTTGAGAGCGCCACACCTTACACGAGGTTGTTGAAAGAAGCGACCATCCCATTGAT
AAGTAGAAGGGACTGCCTTGCACAAAGTGTGTACGGCACAAGATTGTCCACTAACATGTT
TTGTGCCGGTTATATAAGAGGAGGGGTGGATACGTGTCAAGGGGATTCGGGTGGCCCGCT
CCTGTGCCAAGCAAACGATGGTTTATACTACGTGTGGGGTGTGGTTAGTTGGGGCAACGG
TTGCGCCCAACCCAGGTCACCAGGTGTTTATACTAACGTTGCAAACTACGTTGGTTGGAT
CACAAGGAATACTGGAATAACATTC
| ProSiteProfiles |
SRCR (IPR001190) - T[139-250] 18.485 - T[470-571] 24.959 |
| SMART |
SRCR-like_dom (IPR017448) - T[139-250] 3.9E-10 - T[470-571] 1.0E-33 |
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[140-251] 5.0E-17 - T[467-573] 3.7E-28 |
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[149-253] 2.75E-15 - T[467-571] 4.84E-28 |
| Pfam |
SRCR (IPR001190) - T[152-250] 1.6E-15 - T[474-570] 9.7E-22 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[260-297] 7.07E-8 - T[302-343] 1.7E-8 - T[427-461] 1.44E-7 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[261-298] 12.188 - T[302-340] 12.012 - T[427-462] 11.825 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[261-297] 9.4E-9 - T[303-339] 7.4E-8 - T[428-461] 1.2E-7 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[261-299] 5.5E-9 - T[302-341] 1.9E-7 - T[427-463] 1.6E-8 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[262-297] 7.05024E-7 - T[303-339] 9.00937E-7 - T[431-461] 6.77211E-8 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[273-294] 2.2E-17 - T[315-336] 2.2E-17 - T[437-458] 2.2E-17 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[317-339] . - T[439-461] . |
| ProSiteProfiles |
Pan_app (IPR003609) - T[339-424] 8.115 |
| Pfam |
Pan_app (IPR003609) - T[360-422] 2.5E-9 |
| PRINTS |
SRCR (IPR001190) - T[470-486] 3.5E-10 - T[490-501] 3.5E-10 - T[505-515] 3.5E-10 - T[536-550] 3.5E-10 - T[559-571] 3.5E-10 |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[611-865] 1.16E-82 |
| SMART |
Trypsin_dom (IPR001254) - T[625-860] 6.9E-94 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[626-865] 36.812 |
| CDD |
Trypsin_dom (IPR001254) - T[626-863] 2.62965E-85 |
| Pfam |
Trypsin_dom (IPR001254) - T[626-860] 4.0E-69 |
| ProSitePatterns |
TRYPSIN_HIS (IPR018114) - T[662-667] . |
| ProSitePatterns |
TRYPSIN_SER (IPR033116) - T[810-821] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NETR_HUMAN | 33.945 % | 224 | 7.61E-62 |
| TMPS3_HUMAN | 31.279 % | 201 | 1.63E-56 |
| HGFA_HUMAN | 40.357 % | 212 | 1.41E-58 |