- Transcript 'KH2012:KH.C1.1039.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1039.v1.A.nonSL6-1
Possible name(s)
HGFAC; PRSS12; TMPRSS3
Gene model
Location
KhC1 [696,175 / 701,862]
Amino acid sequence
Length: 874
>KH.C1.1039.v1.A.nonSL6-1
GRCVTNMGVTKLWMVVLLLWLVCDVIYAGRQQGRGRQRNRENRRGGRGRRPPNVGRGPPT
SGSRSTVDDIFSLFFGEDTSFSFSHTGNSFLWSIGGPTPTTPVAPTTPATPATTTTTTAA
STATNDDITMNLPWRGKGSFTGDVRIDCRNKRGGCYKGGVQVFNREEGRWGNVCGAGWGK
MDANVVCKYLKYKKGAKKHLRLRKAKLSVVGKRLSPMLRNIRCTGGEAKLTECDGEAMRD
GEGCEGERFAGVVCQGKQTILEDDVTCSSSETRCANRKTCVTSQHVCDGTSDCPWGSDEE
NCGTTGVCDVDKFWCGAGGGGCVSRSFVCDGDRDCVNGTDEIGCVQYLRQFTWLRNAKLQ
LTAGDYNSGWRHVTPYTCAKKCREEKRFDCVSFDYHKDTKECDLTTHSSRNARLVRPREG
NWDHYELKTPRRCPGFRCVTSWSCIPASQQCDGEVQCRDGSDERNCSDVGGGFTIRLASG
VSSYEGHLEVKRAGEDFGLVCDIGWSMNEANVACRQLGFRGALMALSGQFFQRSHRAYML
SDVTCRGDEVTIDECRHSGWGVKDCPMDHEAGVVCIFGDVAIPTTTPTTTTTRGTTTAQR
ITTTATPRRTTATPPRCGVKPSTENHAIPRIVGGNFAQPNEWPWQVAIWLPWQFKCGGTL
IDSCWVLTAAHCFSQQYDVSNYWIRLGDHQSTVVDGTEQDFKIERIIKHNFNTNTNDNDI
ALIELKRHNGRCARLNEVVKLACLPTSLNQFPGGTKCHIVGWGQTSFESATPYTRLLKEA
TIPLISRRDCLAQSVYGTRLSTNMFCAGYIRGGVDTCQGDSGGPLLCQANDGLYYVWGVV
SWGNGCAQPRSPGVYTNVANYVGWITRNTGITF+
Nucleotide sequence
Length: 2,621
>KH2012:KH.C1.1039.v1.A.nonSL6-1
AAGGTAGATGCGTCACAAACATGGGTGTTACGAAACTATGGATGGTTGTGTTGCTATTGT
GGTTGGTTTGTGATGTCATATATGCAGGGAGGCAGCAAGGAAGAGGCAGACAAAGAAACC
GTGAGAATAGACGTGGAGGTCGAGGAAGGCGACCGCCAAATGTGGGGAGGGGTCCGCCAA
CAAGCGGCAGTCGATCAACAGTAGATGATATATTTTCTTTGTTCTTCGGTGAAGATACTT
CTTTCAGTTTCTCACATACGGGGAATTCCTTTCTATGGAGCATAGGTGGACCCACCCCAA
CAACCCCTGTTGCCCCTACCACCCCCGCAACCCCCGCAACAACAACAACAACAACTGCCG
CGTCCACAGCGACCAATGATGACATAACAATGAACCTACCATGGCGGGGCAAAGGAAGCT
TTACGGGCGATGTTCGCATTGATTGTCGGAATAAGAGGGGTGGTTGTTACAAGGGTGGTG
TTCAAGTATTTAACAGGGAGGAGGGTCGGTGGGGGAACGTGTGTGGGGCGGGGTGGGGTA
AGATGGATGCTAACGTCGTGTGTAAATACCTCAAGTATAAGAAAGGAGCAAAGAAACATC
TTCGGCTTCGCAAAGCAAAGTTGTCAGTTGTTGGGAAAAGGTTATCACCGATGTTACGAA
ACATACGGTGTACGGGCGGTGAGGCGAAGTTAACCGAGTGTGACGGTGAAGCCATGCGTG
ACGGAGAGGGTTGTGAGGGGGAAAGATTCGCTGGGGTTGTTTGCCAGGGAAAACAAACGA
TCCTTGAAGATGACGTCACGTGCTCGAGTTCCGAAACACGATGCGCGAATCGTAAGACGT
GTGTTACGTCACAACACGTATGCGATGGGACGAGTGATTGTCCTTGGGGTAGCGATGAAG
AGAACTGTGGAACAACTGGTGTTTGTGACGTGGATAAGTTCTGGTGTGGGGCCGGGGGAG
GGGGGTGTGTTAGTCGAAGCTTTGTTTGCGATGGAGACAGAGATTGTGTGAACGGGACGG
ATGAGATTGGGTGTGTGCAATACCTGCGTCAGTTTACATGGCTACGAAACGCCAAGCTCC
AATTAACCGCTGGTGACTACAACTCGGGTTGGCGCCATGTTACTCCATATACTTGTGCGA
AGAAATGTAGAGAAGAAAAACGATTTGACTGCGTGTCGTTCGATTATCATAAGGATACAA
AGGAGTGTGACCTCACAACGCATTCGAGTAGAAACGCTCGCTTGGTGCGCCCGAGAGAAG
GGAACTGGGATCATTATGAACTTAAGACGCCTAGGAGGTGTCCTGGGTTTCGATGTGTTA
CGTCATGGTCGTGTATACCAGCATCCCAACAATGTGATGGAGAGGTTCAATGTAGGGACG
GGTCGGATGAAAGAAACTGCAGTGACGTAGGAGGAGGATTTACCATCCGTCTGGCATCGG
GGGTTTCCTCATATGAGGGTCATCTGGAGGTCAAGCGGGCTGGGGAGGACTTTGGGCTCG
TGTGCGACATCGGGTGGTCGATGAATGAAGCGAACGTCGCGTGTAGACAATTGGGATTCA
GAGGTGCATTGATGGCGCTAAGTGGTCAATTCTTTCAACGAAGTCATCGCGCGTATATGC
TTAGTGACGTCACATGCAGGGGTGATGAGGTCACTATAGATGAATGTCGTCATAGTGGGT
GGGGGGTAAAAGATTGCCCAATGGACCATGAAGCTGGGGTGGTTTGTATATTTGGTGACG
TTGCTATTCCTACAACGACGCCAACAACAACAACTACACGTGGAACAACTACAGCACAAA
GAATAACAACAACAGCGACGCCACGACGTACAACAGCCACGCCACCAAGATGTGGCGTGA
AGCCATCCACCGAAAACCACGCCATACCGCGTATAGTGGGTGGCAACTTTGCTCAACCCA
ATGAATGGCCATGGCAGGTAGCAATTTGGTTACCTTGGCAATTCAAATGTGGAGGGACTT
TGATTGACAGTTGTTGGGTGTTGACGGCGGCTCACTGCTTCTCACAGCAGTATGACGTCA
GTAACTACTGGATACGCTTGGGTGACCACCAATCAACGGTCGTAGATGGCACAGAACAGG
ATTTCAAAATTGAAAGAATAATTAAACATAATTTCAACACAAACACAAACGACAACGACA
TTGCTTTGATTGAGTTGAAACGTCATAACGGCAGATGTGCTCGACTCAACGAAGTTGTGA
AACTAGCTTGTCTACCAACGTCGTTGAACCAGTTTCCTGGTGGAACAAAATGTCATATAG
TTGGTTGGGGACAAACGTCATTTGAGAGCGCCACACCTTACACGAGGTTGTTGAAAGAAG
CGACCATCCCATTGATAAGTAGAAGGGACTGCCTTGCACAAAGTGTGTACGGCACAAGAT
TGTCCACTAACATGTTTTGTGCCGGTTATATAAGAGGAGGGGTGGATACGTGTCAAGGGG
ATTCGGGTGGCCCGCTCCTGTGCCAAGCAAACGATGGTTTATACTACGTGTGGGGTGTGG
TTAGTTGGGGCAACGGTTGCGCCCAACCCAGGTCACCAGGTGTTTATACTAACGTTGCAA
ACTACGTTGGTTGGATCACAAGGAATACTGGAATAACATTC
| SMART |
SRCR-like_dom (IPR017448) - T[144-255] 3.9E-10 - T[475-576] 1.0E-33 |
| ProSiteProfiles |
SRCR (IPR001190) - T[144-255] 18.485 - T[475-576] 24.959 |
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[145-256] 5.1E-17 - T[472-578] 3.7E-28 |
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[154-258] 2.75E-15 - T[472-576] 4.84E-28 |
| Pfam |
SRCR (IPR001190) - T[157-255] 1.6E-15 - T[479-575] 9.8E-22 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[265-302] 7.07E-8 - T[307-348] 1.7E-8 - T[432-466] 1.44E-7 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[266-304] 5.5E-9 - T[307-346] 1.9E-7 - T[432-468] 1.6E-8 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[266-302] 9.5E-9 - T[308-344] 7.4E-8 - T[433-466] 1.2E-7 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[266-303] 12.188 - T[307-345] 12.012 - T[432-467] 11.825 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[267-302] 7.74488E-7 - T[308-344] 9.89715E-7 - T[436-466] 7.36614E-8 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[278-299] 2.2E-17 - T[320-341] 2.2E-17 - T[442-463] 2.2E-17 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[322-344] . - T[444-466] . |
| ProSiteProfiles |
Pan_app (IPR003609) - T[344-429] 8.115 |
| Pfam |
Pan_app (IPR003609) - T[365-427] 2.6E-9 |
| PRINTS |
SRCR (IPR001190) - T[475-491] 3.6E-10 - T[495-506] 3.6E-10 - T[510-520] 3.6E-10 - T[541-555] 3.6E-10 - T[564-576] 3.6E-10 |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[616-870] 1.17E-82 |
| SMART |
Trypsin_dom (IPR001254) - T[630-865] 6.9E-94 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[631-870] 36.812 |
| CDD |
Trypsin_dom (IPR001254) - T[631-868] 3.74737E-85 |
| Pfam |
Trypsin_dom (IPR001254) - T[631-865] 4.1E-69 |
| ProSitePatterns |
TRYPSIN_HIS (IPR018114) - T[667-672] . |
| ProSitePatterns |
TRYPSIN_SER (IPR033116) - T[815-826] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NETR_HUMAN | 33.945 % | 225 | 7.34E-62 |
| TMPS3_HUMAN | 31.279 % | 201 | 1.52E-56 |
| HGFA_HUMAN | 40.357 % | 212 | 1.39E-58 |