- Transcript 'KH2012:KH.C7.199.v2....' >
- Transcript 'Phfumi.CG.MTP2014.S7...' >
- Transcript 'Boleac.CG.SB_v3.S4.g...' >
- Transcript 'KH2012:KH.C7.199.v2....' >
- Transcript 'KH2012:KH.C1.1182.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1182.v1.A.SL1-1
Possible name(s)
HERC2; RCC2
Gene model
Location
KhC1 [3,263,417 / 3,271,680]
Amino acid sequence
Length: 477
>KH.C1.1182.v1.A.SL1-1
KVMPRRKQEPKKVAEPESKRQKEEASSDENGKDKILIVPSEDSKENKILLSLPENSGEVL
ICGGTNWSVNSRKKARKGDEKYENVGKNLFKPHRYKSLVGIKVSRVITGCCSNHNLIITN
EGNVYSWGRNECGQLGHGNRVRYDSPKPIDSLQSYKVVNGATGKNHTLCLTENGDVFAFG
DNAQGQLGLGNLSTNVPSPTHIAYKGNPIVDVSCGGEFSVILDCEGYVYSFGCPEYGQLG
NNTDGKYFASGNKMAFDNVKNAFRIPLWVEKLKGGQVLPLNDVKITSISCGNNHVVALDS
KKRVFTWGFGGYGRLGHSEQKDEHTPRLLTVFERAGRGAVQVYAGYSFSIALNEMGSTMF
WGLQGSISSRETTMYPKPLPDLQGWEIRSIGCGYRHTVVAADESVIVWGTGTSNGELGLG
ESRKSSANPDLMKSASNLFIQRVSCGQTHTLMIARNKDEKDQAALDEIPLYDPKHCP
Nucleotide sequence
Length: 2,409
>KH2012:KH.C1.1182.v1.A.SL1-1
CGATATTTGTAAAAAATAGGGAAAATTTTACGCAAGTATTATCTGTAACTGAAAAGTCAT
GCCAAGAAGAAAGCAAGAACCAAAAAAGGTTGCAGAACCAGAGAGTAAAAGACAAAAAGA
AGAAGCTTCATCAGATGAAAATGGGAAAGATAAAATATTAATTGTTCCTTCTGAAGATTC
AAAAGAAAACAAAATATTGCTGTCACTACCTGAAAATAGTGGAGAGGTGTTAATATGTGG
AGGGACTAACTGGAGTGTTAACAGTAGAAAGAAAGCAAGGAAAGGGGATGAAAAATATGA
AAATGTTGGGAAAAATTTGTTCAAGCCTCATCGGTATAAATCGTTGGTTGGAATCAAAGT
GAGTCGAGTTATCACGGGATGTTGTTCGAATCATAACTTGATTATCACCAATGAAGGGAA
CGTTTATTCATGGGGTCGAAACGAATGTGGTCAACTTGGCCACGGTAATAGAGTTAGATA
CGATTCTCCTAAACCTATCGATTCATTGCAATCATACAAAGTGGTGAATGGAGCAACAGG
GAAAAACCACACGCTGTGTTTGACTGAAAATGGCGATGTGTTCGCTTTTGGGGATAATGC
TCAAGGCCAACTTGGTTTAGGTAATCTGAGCACAAACGTACCAAGCCCAACCCATATAGC
TTACAAAGGAAACCCCATAGTAGATGTATCATGTGGTGGGGAGTTTAGTGTTATACTGGA
TTGTGAAGGTTATGTTTACTCCTTTGGTTGCCCAGAGTATGGCCAGCTAGGAAACAACAC
TGATGGAAAATATTTTGCTTCTGGAAACAAGATGGCGTTCGATAACGTGAAGAATGCTTT
CCGTATTCCATTGTGGGTGGAAAAGTTAAAGGGGGGGCAAGTTCTGCCTTTGAATGATGT
GAAAATAACGAGCATTTCTTGCGGAAATAATCATGTGGTGGCATTAGACTCCAAAAAGCG
GGTGTTCACGTGGGGTTTTGGTGGGTATGGTCGGCTGGGTCACTCGGAACAAAAAGACGA
ACATACCCCTCGTTTACTGACTGTGTTCGAACGAGCGGGACGAGGTGCTGTGCAAGTTTA
CGCCGGATATTCTTTCTCTATTGCATTGAATGAAATGGGCTCTACTATGTTCTGGGGTCT
ACAAGGCAGCATCAGTAGTCGTGAAACAACCATGTATCCAAAACCGCTCCCAGATTTGCA
GGGTTGGGAAATAAGAAGTATTGGCTGTGGTTATCGTCATACTGTTGTTGCTGCAGATGA
AAGCGTTATAGTATGGGGAACGGGAACCTCAAATGGAGAATTGGGGTTGGGTGAATCTCG
CAAATCGAGCGCAAATCCTGATCTAATGAAAAGTGCAAGCAATCTTTTTATTCAGCGTGT
ATCATGTGGGCAAACACACACACTAATGATAGCCAGAAATAAAGATGAAAAAGACCAAGC
TGCTCTAGATGAAATACCACTGTATGACCCAAAACATTGTCCATGAATTTTGAGGGAAAT
TAAGTTACTAAAATGATAGTTCAAAAAATGCTTTAACATAAATACAGAAGCAATTTGATA
AGTCTGTACTACTTGTTTCTAGCTTCAAATATTTGAACTAAATGTAAATAACTAGAAATT
TTCAATTCGTAGGAATTTTCAATTTCTAGTTTGATTTTTTACCTTGTCTGTTTTTGAACT
TCATCTCAACTATTAAATTTACAAATGAAAAATCTTTAAAATACCGGTCATTAAAAATTT
GTGGGTGTAATTTGTTTGCAACTTTGTCTGTCTTGTTTTTTGTTTGACTGCCCAGCTAAA
CTAAAAAGCTAAAAAAGTTTACTGCCCAGCTAAGTAATTCCAATCATCATAATTATTTTT
TGTTGTTTGCTGCAAAAATCTTTTTTTTTGTAACTTCTGTGTTTTGAACTAAACTTCAGT
GCATTTGTAAACCAGGGATGGTTTTCTCAGCTACCGACTAAACTCGTCGCCGCCTAAATC
GTCGGACTAAAATTAACTTCTGTAATAATAAGTAATGCATAGAAATTTAGTCGGTCAACT
ATAAAAACGTGGTAACCAATAGTAACCGGCGAAAGACTAACTTAAGTTGGTAGCCGAGAA
AACCGTCCAGAAGTACTATATGTCGTGTCAAAATTGGCTGCAGTTACTTTCTGAGCTATG
CACACTTGTCGATGAACTTTTTAACATTCTGATTAGATCACTGCATGCCTTAAGTTCAAC
TACTAAAACAGCTTTTGATACGATTACCTCACTGGCAACTGTGATTGCTTTTTTTTGGCG
AGCGTCCATTCCATGTGATATCTAAAATGTGGTTTGGTTAAAATCAGCCACGCCAAAACC
ATTCTGTTCTTTATTGTTTTCTTTATTGTAAAAATACACACTTGATAATAAACGGTACTA
GAGTGTCAA
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[20-260] 1.6E-49 - T[261-462] 5.7E-39 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[55-456] 1.92E-80 |
| Pfam |
Reg_chr_condens (IPR000408) - T[121-170] 1.3E-12 - T[173-222] 2.9E-12 - T[225-298] 4.8E-10 - T[303-352] 7.8E-10 - T[404-453] 1.1E-4 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[122-173] 17.017 - T[174-225] 14.524 - T[226-301] 12.916 - T[302-355] 12.233 - T[403-456] 13.881 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[123-139] 2.2E-14 - T[157-170] 2.2E-14 - T[176-192] 2.2E-14 - T[288-304] 2.2E-14 - T[304-318] 2.2E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC2_HUMAN | 29.299 % | 138 | 1.27E-34 |
| RCC2_HUMAN | 48.753 % | 463 | 3.86E-160 |
| HERC1_HUMAN | 29.134 % | 127 | 4.9E-31 |