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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.14.v1.A...'
  2. Transcript 'KH2012:KH.C11.205.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.205.v1.A.SL1-1

Possible name(s)

ARHGEF7; LASP1; PEX13

Location

KhC11 [2,608,999 / 2,612,318]

Sequences

Amino acid sequence

Length: 389

>KH.C11.205.v1.A.SL1-1
FKMAANGAPPKPWEINRGQSPSNNLRSSSLTRPESGEFPTPPPIPARPNQQSTSATMYRP
TYGNLGSYGGGYNFGGYGGYGSGMYGSSGLYGTGGGMYGSSYRNYGTPPNGVGSFTQQAE
DSTRQAFQSVESIVRAFTSVSAMLESTFGAVYSSFRAVLDVADHFSRVRSTFSEILSSIA
IFRLFRYLYRRVLAIFGSRECEDAWSNAAVDGALMRPNSSSQKKSWPIMLFAAVVMGGPY
LIWRLMRGANSQKPANISWMNGDGDHVVAKAEFDFSSESEEEISFLAGDTIILAPRAQQP
HIRGWLLGTIDGKNPGYLPANYVKILGLRRGRAKPTTPPTPAANISTTTTTTPPAGLSTE
GTVSNEEWQNIHSGSERLGPPEEPPTQQS

Nucleotide sequence

Length: 1,658

>KH2012:KH.C11.205.v1.A.SL1-1
TGTGGTAGCTTAACCCAAGTAATTCAAAATGGCTGCTAATGGGGCTCCCCCTAAACCCTG
GGAGATAAACAGGGGTCAATCACCCAGCAATAACCTTCGTTCTTCGTCCCTTACCCGCCC
TGAATCCGGGGAATTCCCTACTCCACCCCCAATACCCGCCCGACCGAATCAACAGAGCAC
ATCAGCTACAATGTACAGACCAACTTATGGCAACCTTGGTTCATATGGGGGCGGCTATAA
CTTTGGTGGTTATGGGGGCTATGGCAGTGGTATGTATGGCAGTAGTGGTTTGTATGGCAC
TGGGGGAGGTATGTATGGTTCGTCATATCGTAACTATGGCACCCCACCCAACGGAGTTGG
TAGTTTCACTCAGCAAGCAGAAGACAGCACACGACAGGCATTTCAATCCGTTGAATCAAT
TGTTAGAGCTTTTACTTCTGTGTCAGCCATGTTAGAATCTACATTTGGAGCAGTATACAG
TTCCTTTCGTGCTGTACTTGATGTAGCTGACCACTTTTCGAGAGTGCGTTCTACATTTTC
AGAGATTCTCTCTTCAATAGCAATATTCAGATTGTTCCGTTACTTGTATCGAAGAGTGTT
GGCTATATTCGGCTCACGAGAATGTGAAGATGCTTGGTCAAATGCAGCTGTAGATGGAGC
GCTTATGAGACCAAATTCGTCATCACAAAAAAAATCTTGGCCAATCATGTTGTTTGCTGC
AGTGGTAATGGGAGGTCCTTATCTAATATGGAGACTGATGAGGGGAGCTAACTCGCAAAA
ACCTGCCAATATTTCGTGGATGAACGGAGACGGCGATCATGTGGTTGCTAAAGCAGAGTT
TGATTTTAGCAGCGAGAGTGAAGAGGAAATCTCGTTTCTTGCAGGAGATACCATCATCCT
TGCACCAAGAGCTCAACAACCCCACATAAGAGGTTGGTTACTCGGAACGATAGATGGGAA
AAATCCAGGCTACCTTCCCGCAAATTATGTTAAAATTCTCGGTCTGCGACGAGGGCGTGC
AAAACCAACCACACCACCTACACCAGCTGCCAATATAAGCACAACAACTACCACAACACC
TCCTGCTGGTTTATCTACAGAGGGAACTGTATCAAATGAGGAGTGGCAGAACATTCACAG
TGGTAGCGAAAGACTCGGACCACCAGAAGAGCCTCCAACTCAACAATCGTAATCCTGGAA
ATATCTCTTAATTTCATGGCCACCCTTGAGTTGGATCTATTGCACAACATGCAGTCTTCC
GTGCCAGTCACTGACTGCAACCATGCTTGGTAGTACGGGGTGACAGCGTACGTCTACACA
TGCTGCATCCTGGCCATCATTTGTTGGCGGCAATGGCACTGTCCGCAAATAATTACCATT
GCTGTGTTTGTAGCAAACCAGAGATTCACTGGAGCTTCCAGAATATACAAAACTACCATC
CTTAGTTATGTCAAAAGACACCGGAAATTCGTTGACCTTTTGGGAAAAAAAATAATGAAG
TAAAAGTGACAAAATATCATATGATTTTTAATTTTATTCTTTTTTTTATATATATTCATT
GCGGTACAGTGGCTCAAAAAAAAATTCTGCGGATCTGTGATATAGTTATTAATCTATTGT
ATGCCTTAATTATTCAGTGCAATAAAAGAATTCTGTTA

InterProScan

Pfam
Peroxin-13_N (IPR007223) - T[114-246] 1.1E-42
SUPERFAMILY
SH3-like_dom_sf (IPR036028) - T[255-327] 3.02E-13
ProSiteProfiles
SH3_domain (IPR001452) - T[264-328] 11.534
SMART
SH3_domain (IPR001452) - T[267-327] 1.9E-9
Pfam
SH3_domain (IPR001452) - T[271-324] 7.7E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PEX13_HUMAN 48.447 % 283 8.18E-93