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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.584.v1....' > 
  2. Transcript 'KH2012:KH.C1.1278.v1...'

Transcript Model

Transcript Id

KH2012:KH.C1.1278.v1.A.nonSL4-1

Possible name(s)

NSMCE1

Gene model

KH2012:KH.C1.1278

Location

KhC1 [4,766,459 / 4,767,955]

Sequences

Amino acid sequence

Length: 279

>KH.C1.1278.v1.A.nonSL4-1
FSSKLIRKYCAMSAYKKCHIYFLQSIMNKTILSESECQQIRQESYQVSEVTPEGNLLDFL
QVINDQLHPFHFKIRQSKREDTGETVYVLISLVDNDLNRLVVGGDFARAELEYFKKILEI
IIVMSDTQNVGTASSIDILNLADSCSPRMSKTEAKRLLTRFVDERWFYDNEGIISLSPRC
ILELEQYLSQCFDSFVSVCTMCSNTVFQAQVCSNCSARMHHHCARTYSKRKTTSLKCLSC
NHPFPHLQSEDNGVTGESTSFHTENTSESSRKKKRTHAH

Nucleotide sequence

Length: 1,496

>KH2012:KH.C1.1278.v1.A.nonSL4-1
AGTAATGTTTTGATAGAAAGTTTGATTTTCCTCCAAATTAATACGCAAATATTGTGCAAT
GAGCGCGTATAAAAAATGTCACATCTATTTTTTACAATCAATAATGAACAAAACAATATT
AAGTGAAAGCGAATGTCAGCAAATTCGTCAGGAAAGTTACCAAGTTTCTGAAGTAACGCC
AGAGGGAAATCTTTTGGATTTTCTACAAGTTATTAATGACCAACTTCATCCGTTTCATTT
TAAAATTCGCCAAAGCAAGCGTGAAGACACTGGAGAAACAGTTTACGTTTTAATAAGTTT
GGTGGACAATGACCTTAACCGTTTAGTCGTCGGTGGCGATTTCGCGCGCGCTGAACTGGA
ATATTTTAAGAAAATCCTGGAAATCATAATTGTCATGTCAGATACACAAAACGTGGGGAC
TGCGTCTTCAATTGATATTTTAAATTTGGCTGATTCTTGTTCACCGAGAATGAGCAAAAC
TGAAGCCAAGAGGTTGCTCACACGGTTTGTGGATGAGCGGTGGTTTTACGACAACGAAGG
AATCATCTCTTTATCTCCACGTTGTATTCTCGAACTAGAGCAGTATCTATCTCAGTGCTT
CGACAGTTTTGTGTCAGTATGCACAATGTGTTCAAACACTGTTTTTCAAGCTCAAGTTTG
CTCGAATTGTTCTGCGCGTATGCATCACCACTGTGCAAGAACGTACAGCAAAAGAAAAAC
CACTTCTCTAAAATGTCTTTCTTGCAATCATCCATTTCCACACCTTCAGTCAGAAGATAA
TGGTGTCACAGGGGAAAGTACCTCTTTTCATACTGAAAATACTTCAGAATCATCACGAAA
AAAGAAAAGAACCCATGCTCACTGATTTTCGTTTTAAAGTAGAACTTATGCTGTGTCTTA
ACAATACACACAAAAATCGGGAGCATGGCGAGCTTCATTAGTATAAAACAATGTTCATGG
TTAGTAACACCTGCTAGTCATGTTCATGTGTAATATTGTTCTTCCGTATTTTAGAGACGC
CCAATCTTTTCCCCGAATTTGTTACATCAAAATGTCTCCAAATAACTGAAAGGCTTAGTT
GCAATGTTTTAATGTCATTTTAAAACTAGCCTACATTTAAACAAAAAATACTAAAACATA
CTTGCCTAATTAGAATGTTGTTTTTGGTGCTTTTTGCTGTTTATGTACTTTTTTTCTATG
ATTATAACAGTAAAGACACATGTTGCTTACTTGAATTAAAATCTTTTGTTTTGTATTCAA
AGTATAAATTTCAAGATGTTTTGATAAAAATTACTCAAATTTATATTAAAACACACAAAA
TCAAGTGTATACATATGCATACAGTTAATTGTATATGTAATCCATCAGCAGTACACTACA
ATTGTAGTTGACTGTGTACAGGCTGTTTTCTATTTGTACATTGTGCACATTGTGGTCTGA
GAAATATTTTTAAACAATTTCATTTCTAACAATTTCTTCTTTTCAATTTTCCAAAG

InterProScan

PANTHER
Nse1 (IPR011513) - T[11-270] 1.0E-64
Pfam
Nse1 (IPR011513) - T[21-184] 1.2E-21
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[101-195] 9.7E-26
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[197-252] 1.5E-10
Pfam
Znf_RING-like (IPR014857) - T[199-240] 3.8E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NSE1_HUMAN 33.333 % 142 6.88E-41