- Transcript 'KH2012:KH.L41.49.v3....' >
- Transcript 'KH2012:KH.C2.69.v2.A...' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- EST 'AHC0AAA225YI11_RM1' >
- Transcript 'KH2012:KH.C11.298.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.298.v1.A.SL1-1
Possible name(s)
ZNF235; ZNF454; ZNF836
Gene model
Location
KhC11 [1,902,061 / 1,903,564]
Amino acid sequence
Length: 143
>KH.C11.298.v1.A.SL1-1
VCDKAFATSSNLTTHERVHSGENPYKCEVCYKTFKQASHLKQHFMTHTKERPHECDICKA
TFARVSNLKRHQLIHTGEKPFKCDVCEQSFARTTALIDHKKIHTNEKPHKCKTCMKDFRQ
LAVLRRHEKTHLIKIKQKKARKS
Nucleotide sequence
Length: 1,503
>KH2012:KH.C11.298.v1.A.SL1-1
TGTGTGTGACAAAGCATTTGCAACAAGTAGTAATCTGACAACTCATGAGCGTGTCCATAG
CGGAGAAAATCCTTACAAGTGCGAAGTTTGTTACAAAACATTTAAACAGGCTAGTCATTT
AAAGCAGCACTTTATGACGCACACCAAAGAAAGGCCCCATGAGTGTGACATATGCAAAGC
AACATTCGCACGTGTATCAAACCTGAAGCGCCATCAATTGATTCATACTGGAGAAAAGCC
TTTCAAATGCGATGTTTGTGAACAGTCCTTTGCTCGTACCACCGCCTTAATAGATCATAA
AAAAATCCACACTAACGAGAAGCCTCACAAGTGCAAAACATGTATGAAAGACTTTAGGCA
ACTTGCGGTATTGCGGAGACACGAAAAAACACATTTGATTAAAATCAAACAGAAGAAGGC
GCGCAAGTCTTGAGAATCGAGATTAAAAGTATCTACTGTTTAATATATCCACTGTTTAAT
TACTTGTATTACACTGTAATTTGCCAGCAATTCTGTTTTTACCGACCAATTTATAATAAT
TTAATATACAATTGTGATGCTTAAGCTGAACCAATATCTTTCATGTCGATGTCACAATCA
TTAAATCATAGCTACTTGATTTTGCATAGTATATATTATAAGTGTTTTATATATGCATAA
CAGATAACAGTATAACTGTCTTGTTTGTATAGAATAAGTATTAAATTTAAAGATAAGAAT
TAAAGGATAAATTTTCAAACAAAGTTTTATAATAAAGACCAAGAAAAATAAAACTACAGT
AAAAGCTGCAACAAGGTATTTGCCATTACTGCCTGAATAGTTTTCTTGTAAAAAGTGTAT
GAGAGGTTGCATATTGCATTAAAACACCTCAGTTAACAATTTTGCTTGTTTCAAGTGCAG
CAAATATTTTGCCATATTATTCGCATCAGCAAAAAGTCATTTAAATGAAAAATTTGTAAA
TAATGTATTCCCACCATAGTATTATGGCATTCACTTTAAACCTGTTTCTACCATTTTAAT
ATGAAACTAGTAATATAAAAGTTCTAAAATAAAACTCTAATTAGTAGTTTAACATCACTG
CAAGATTTTATAAATAACAAAGCAAGTCCCTGAATTATCCATAAACCACATTTTGCCAAA
AATTACAGCCCCAAACAGTATTAAAAGCATGATCATACTTCTTTAGCATTGTATAGTCTT
ATAAGGTAAAAATATTTAAGTATAATTTTCTTGGAAACCCATTTTTGTGGTCCCACTGCT
TTAATATCATAGAGTGCATTGCAAGGAAAAAATCTGCGACATGGTTTTGTATCAAATGCA
TCTTTTTGCGTAGCATAATATTAATTTTAAACACCAAGTAAAGTATAGATCTTTGTGGGA
TAGTTATTTTTATCTTACTGTAACAAAGGTACTACAGAAAGAACCACTAAATGTTATATT
AATTCAGAAATTGTATATATTTTCTATCTATTACTTTACCTAACCTTTATTTACTTTATT
CAG
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[1-24] 13.11 - T[25-52] 15.105 - T[53-80] 14.981 - T[81-108] 15.23 - T[109-131] 10.429 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[1-47] 2.05E-15 - T[33-90] 9.86E-22 - T[75-127] 2.84E-17 |
| SMART |
Znf_C2H2_type (IPR013087) - T[1-19] 60.0 - T[25-47] 0.011 - T[53-75] 0.0034 - T[81-103] 0.0051 - T[109-131] 0.35 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[27-47] . - T[55-75] . - T[83-103] . - T[111-131] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN836_HUMAN | 51.145 % | 149 | 1.39E-42 |
| ZSC22_HUMAN | 50.769 % | 149 | 1.29E-43 |
| ZN724_HUMAN | 54.615 % | 147 | 2.06E-42 |