- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.L41.49.v3....' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C11.298.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.298.v1.A.SL2-1
Possible name(s)
ZNF235; ZNF454; ZNF836
Gene model
Location
KhC11 [1,901,579 / 1,903,564]
Amino acid sequence
Length: 301
>KH.C11.298.v1.A.SL2-1
SEMPKVAKIKVMKSKEKKECDRKFRQSSKLAIRFKVRTEKSSFRCDVCEKLFYDPEIFNS
HKFLHVKEKPFKCLICEKTFSRMSYLKLHENVHKEERPFTCNICDKAFKQPIDVKRHMVV
HYETKPYKCNICLKCFKHNSTLNSHKSVHTKIKLFKCSVCDKAFATSSNLTTHERVHSGE
NPYKCEVCYKTFKQASHLKQHFMTHTKERPHECDICKATFARVSNLKRHQLIHTGEKPFK
CDVCEQSFARTTALIDHKKIHTNEKPHKCKTCMKDFRQLAVLRRHEKTHLIKIKQKKARK
S
Nucleotide sequence
Length: 1,985
>KH2012:KH.C11.298.v1.A.SL2-1
ACTTTTTAATCAGAAATGCCTAAGGTAGCAAAAATTAAGGTGATGAAATCGAAAGAAAAA
AAGGAATGTGATAGGAAATTTCGACAATCTTCCAAGCTTGCAATTCGTTTTAAAGTACGC
ACCGAAAAGTCATCCTTTAGATGTGATGTTTGTGAAAAATTGTTTTATGACCCTGAAATA
TTCAATAGCCATAAGTTTTTGCATGTTAAGGAAAAGCCTTTCAAGTGCTTGATTTGTGAA
AAGACATTTAGTAGGATGTCATACCTTAAATTACATGAAAATGTTCATAAGGAAGAGAGA
CCTTTCACATGCAATATATGTGACAAAGCTTTTAAGCAGCCGATTGATGTGAAAAGACAT
ATGGTTGTTCACTATGAAACAAAACCTTATAAATGTAATATATGTCTTAAATGTTTCAAG
CACAACTCCACCTTAAATAGTCACAAATCCGTTCACACTAAAATAAAGCTATTCAAATGT
AGTGTGTGTGACAAAGCATTTGCAACAAGTAGTAATCTGACAACTCATGAGCGTGTCCAT
AGCGGAGAAAATCCTTACAAGTGCGAAGTTTGTTACAAAACATTTAAACAGGCTAGTCAT
TTAAAGCAGCACTTTATGACGCACACCAAAGAAAGGCCCCATGAGTGTGACATATGCAAA
GCAACATTCGCACGTGTATCAAACCTGAAGCGCCATCAATTGATTCATACTGGAGAAAAG
CCTTTCAAATGCGATGTTTGTGAACAGTCCTTTGCTCGTACCACCGCCTTAATAGATCAT
AAAAAAATCCACACTAACGAGAAGCCTCACAAGTGCAAAACATGTATGAAAGACTTTAGG
CAACTTGCGGTATTGCGGAGACACGAAAAAACACATTTGATTAAAATCAAACAGAAGAAG
GCGCGCAAGTCTTGAGAATCGAGATTAAAAGTATCTACTGTTTAATATATCCACTGTTTA
ATTACTTGTATTACACTGTAATTTGCCAGCAATTCTGTTTTTACCGACCAATTTATAATA
ATTTAATATACAATTGTGATGCTTAAGCTGAACCAATATCTTTCATGTCGATGTCACAAT
CATTAAATCATAGCTACTTGATTTTGCATAGTATATATTATAAGTGTTTTATATATGCAT
AACAGATAACAGTATAACTGTCTTGTTTGTATAGAATAAGTATTAAATTTAAAGATAAGA
ATTAAAGGATAAATTTTCAAACAAAGTTTTATAATAAAGACCAAGAAAAATAAAACTACA
GTAAAAGCTGCAACAAGGTATTTGCCATTACTGCCTGAATAGTTTTCTTGTAAAAAGTGT
ATGAGAGGTTGCATATTGCATTAAAACACCTCAGTTAACAATTTTGCTTGTTTCAAGTGC
AGCAAATATTTTGCCATATTATTCGCATCAGCAAAAAGTCATTTAAATGAAAAATTTGTA
AATAATGTATTCCCACCATAGTATTATGGCATTCACTTTAAACCTGTTTCTACCATTTTA
ATATGAAACTAGTAATATAAAAGTTCTAAAATAAAACTCTAATTAGTAGTTTAACATCAC
TGCAAGATTTTATAAATAACAAAGCAAGTCCCTGAATTATCCATAAACCACATTTTGCCA
AAAATTACAGCCCCAAACAGTATTAAAAGCATGATCATACTTCTTTAGCATTGTATAGTC
TTATAAGGTAAAAATATTTAAGTATAATTTTCTTGGAAACCCATTTTTGTGGTCCCACTG
CTTTAATATCATAGAGTGCATTGCAAGGAAAAAATCTGCGACATGGTTTTGTATCAAATG
CATCTTTTTGCGTAGCATAATATTAATTTTAAACACCAAGTAAAGTATAGATCTTTGTGG
GATAGTTATTTTTATCTTACTGTAACAAAGGTACTACAGAAAGAACCACTAAATGTTATA
TTAATTCAGAAATTGTATATATTTTCTATCTATTACTTTACCTAACCTTTATTTACTTTA
TTCAG
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[38-89] 9.28E-13 - T[79-136] 1.54E-17 - T[136-192] 1.43E-18 - T[191-248] 2.79E-21 - T[233-285] 9.59E-17 |
| SMART |
Znf_C2H2_type (IPR013087) - T[43-65] 1.1 - T[71-93] 0.021 - T[99-121] 4.6E-4 - T[127-149] 0.15 - T[155-177] 3.3E-4 - T[183-205] 0.011 - T[211-233] 0.0034 - T[239-261] 0.0051 - T[267-289] 0.35 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[43-70] 11.739 - T[71-98] 14.025 - T[99-126] 12.528 - T[127-154] 12.009 - T[155-182] 16.623 - T[183-210] 15.105 - T[211-238] 14.981 - T[239-266] 15.23 - T[267-289] 10.429 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[45-65] . - T[73-93] . - T[101-121] . - T[129-149] . - T[157-177] . - T[185-205] . - T[213-233] . - T[241-261] . - T[269-289] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN836_HUMAN | 45.018 % | 261 | 2.07E-80 |
| ZN235_HUMAN | 43.911 % | 251 | 3.44E-78 |
| ZN454_HUMAN | 43.525 % | 244 | 1.57E-77 |