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TRANSCRIPT CARD

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  1. Clone 'cien158847' > 
  2. Transcript 'Cisavi.CG.ENS81.R3.1...' > 
  3. Transcript 'Cisavi.CG.ENS81.R3.1...' > 
  4. Transcript 'KH2012:KH.L116.69.v2...' > 
  5. Transcript 'KH2012:KH.C11.532.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.532.v1.A.SL1-1

Possible name(s)

SPRTN

Gene model

KH2012:KH.C11.532

Location

KhC11 [3,689,755 / 3,693,238]

Sequences

Amino acid sequence

Length: 372

>KH.C11.532.v1.A.SL1-1
NMTSCDSDYQLALSLQQQFMEDDFNTNASSSTASSSKQGPTNIVDPQWELIDPNPNVFAL
FQEFNKQFFWKRLDMVEVRWSPRMTLCAGICSYQGHGGLCSIGLSQPLLKLRPRKDLVET
LLIYHSFHDEVNELRQHWWRCRGVCRNRPPYFGFVKRSMNRAPSKNDTWWAQHQQTCGGE
YDKIKEPENYGKNKSKGESYFQPQFPVVKLEPKSNGIKRKSDEIHPNVQPKKKKLPSFIF
LDVSSESDCSDDDISAFTVKNEPLSSDEDLPSWKSQQFNKNTTCSLAKKIKLMEPVKSAD
VKPVTALKPKVSPIKTETTKTTSSDSDDDLPPFYSPDQNLPCPICGERFSPIKINSHVDQ
CLNMQTLREMTS

Nucleotide sequence

Length: 1,427

>KH2012:KH.C11.532.v1.A.SL1-1
CGAAACAAGACATGAAACATGACGTCCTGTGACAGTGATTACCAGTTAGCCCTGTCGCTG
CAACAGCAATTTATGGAAGATGATTTTAATACGAACGCCAGCAGTTCAACTGCTAGTAGT
AGCAAGCAAGGACCAACTAACATAGTTGACCCACAATGGGAACTCATAGATCCAAACCCA
AATGTTTTCGCGTTGTTTCAGGAGTTTAATAAACAGTTTTTCTGGAAGAGACTGGATATG
GTTGAAGTTAGATGGAGTCCAAGAATGACTTTATGTGCCGGTATATGTTCATATCAAGGC
CATGGTGGTTTGTGTTCAATTGGTTTGAGTCAACCACTATTGAAGTTACGGCCAAGAAAG
GATCTTGTTGAAACATTACTTATTTATCATAGTTTCCACGATGAAGTGAATGAACTTCGA
CAACATTGGTGGAGATGTAGAGGTGTTTGTAGAAACAGACCACCCTACTTTGGGTTTGTA
AAAAGATCCATGAATCGAGCACCTTCAAAAAATGACACCTGGTGGGCACAACACCAACAG
ACTTGTGGGGGGGAATACGACAAAATTAAGGAGCCGGAAAATTATGGAAAAAATAAGTCA
AAAGGTGAGAGTTACTTTCAACCTCAATTCCCAGTGGTTAAACTCGAACCTAAATCAAAC
GGTATAAAAAGAAAATCGGACGAGATTCACCCAAATGTGCAGCCGAAGAAAAAGAAACTT
CCAAGTTTCATATTTTTAGATGTTTCATCTGAATCCGATTGCTCCGATGACGACATATCG
GCTTTCACGGTGAAAAATGAACCCTTGTCGTCAGATGAAGATTTACCTAGCTGGAAATCG
CAACAATTTAATAAAAACACCACCTGCTCTCTTGCAAAGAAAATAAAACTGATGGAACCA
GTTAAGTCAGCTGATGTTAAACCAGTCACAGCATTGAAACCAAAAGTATCCCCAATTAAA
ACTGAAACCACAAAAACAACATCTTCTGACAGTGATGATGACTTGCCACCATTTTATTCA
CCCGACCAAAACCTTCCGTGTCCGATCTGTGGTGAACGTTTTAGTCCAATTAAAATAAAC
TCACATGTTGATCAGTGCCTTAATATGCAGACTTTACGTGAAATGACGTCTTGATTGTTT
TATTTTCCAACTTTTTGCTATTTTATTTTTAGTTTGTTTCAGACACATTTAGGCAAACTT
CTACTTTTTCGATTATGTTAACTTAAAACTTTCTAATACTGATCTTACTTGCACTTATGG
AGAGTTAGACCTAGACGTACTTTTAAACTTTTTAAGTAGGACTAAGTTGTTCATTTATTT
CTATCTGCTAACTTCCGTGACACTTTCTTTACAATATTCTTCAAATGTTTAGCATTTTTA
ATACAACATTCAAGCAATTTTATGCATTTCTTTTCCTCACTTTTCAG

InterProScan

SMART
SprT-like_domain (IPR006640) - T[55-184] 2.4E-18
Pfam
SprT-like_domain (IPR006640) - T[59-122] 3.1E-12
SMART
Znf_Rad18_put (IPR006642) - T[339-362] 0.0027

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPRTN_HUMAN 50.222 % 238 1.81E-74