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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.178.v1....'
  2. Transcript 'KH2012:KH.C1.178.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.178.v1.A.SL4-1

Possible name(s)

SSU72

Location

KhC1 [1,966,960 / 1,972,602]

Sequences

Amino acid sequence

Length: 189

>KH.C1.178.v1.A.SL4-1
LSFAVVCSSNMNRSMEAHRCMSKRGYAVESFGSGNQVKLPGSSADRPNVYSFSTKYDDIL
TDLKQKDRNLYTQNGVLNMLDRNRRIKDRPQRFQDYVGQFDVIITLEERVYDQIMEDFNT
RESETMEAVHVINLDIQDNHEEATIGAFVVCELSKKLEGSDDLDNDIDELLQDFEERSKR
RIIHSVHFY

Nucleotide sequence

Length: 1,076

>KH2012:KH.C1.178.v1.A.SL4-1
TTAAGTTTTGCTGTTGTTTGCTCGAGTAACATGAACAGAAGCATGGAAGCACATAGGTGT
ATGAGTAAGCGAGGATATGCGGTTGAATCTTTTGGGTCGGGAAATCAAGTGAAACTGCCC
GGCTCTTCTGCCGATAGACCAAACGTCTACAGTTTTAGTACAAAATATGATGATATTTTA
ACTGACTTGAAACAAAAAGACAGAAATCTATATACACAGAATGGCGTGCTAAACATGTTG
GACCGAAATCGACGAATCAAAGATCGTCCACAACGGTTTCAAGACTATGTTGGCCAGTTT
GATGTAATTATTACGTTGGAGGAAAGAGTTTATGACCAAATAATGGAAGATTTTAACACT
CGAGAATCCGAAACCATGGAAGCAGTACACGTTATAAACCTTGATATACAAGATAATCAT
GAAGAAGCAACCATTGGCGCATTTGTTGTTTGCGAACTTTCGAAAAAGCTGGAAGGATCC
GACGACCTGGACAACGACATAGACGAGTTACTACAGGATTTCGAAGAACGGTCGAAGCGT
CGAATTATACACTCCGTGCACTTTTATTGACTCTAATCTTTTTTCATTCTTAAATCTGCC
ATAGTTTTCGTTATTAGGTTGATAGGCTACACACAGCTTGTAGCGTTTCTACCGACCAGT
TTCATCATGTCTTTTTCAGAAGGTGGTGAAATCACCTGGTTTTTAAGTACGATGAATATC
CTTGGTTTAGGTCGGACAATTCCAGCGACATCAACTTGGTCGTTACGGAACGACAAAGCT
CCTTTTTTTGAACTTTTGATTTCAGAGCAATTCAAAACACTTTCTTTTCGTATATGCTGT
ATTTTTTCGCTTCTTAAGTTATTGTGTTTCATTTTCCTCCAGTTTTTGAATTGTCAAATT
CAAGCAAGAGTTCGACTGACACGCCTATAGTTTGTAATGTAATGCGGCAGTAACAAATGT
AGGTGCACGGTCTTTTACAAACCGGTAAATTTTGGTTGGACAGTGTACGTTAATTTTGAA
TTTATTTATTGCACGGGACTTAATAATTACTTGAATAAAACACGTCTTCATGCAAA

InterProScan

Pfam
RNA_pol_II_suA (IPR006811) - T[1-189] 1.0E-82
PANTHER
RNA_pol_II_suA (IPR006811) - T[2-189] 2.5E-81

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SSU72_HUMAN 61.905 % 262 1.48E-90