- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C1.203.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.203.v1.A.SL1-1
Possible name(s)
ZNF420; ZNF780B; ZNF808
Gene model
Location
KhC1 [6,846,262 / 6,849,425]
Amino acid sequence
Length: 775
>KH.C1.203.v1.A.SL1-1
NMNKKINICKICDKRFSSHANLVNHMKTHQKGNVYLKAEEGNKESDPKVEMKPKKKRRKM
MDRLQEPKVYTCDICSKAFKTNFKLVRHSYIHLEVKPFPCEMCGRRFSRKDHRNVHYKLH
YIENKNCTCRVCGQLFHSEANVVKHIQRVHNANNEHEDVICYDCGETFQYQAQLKRHYNL
YHKLRYYCEICGCESLSDTSYRRHIKKHVLSLPYTCVMCHSNFLSVDAMRQHYCDAELST
PVADVVVRVIVRDSIDLEEEIQPSDQLLALKLEKKFDNRGRKCKYPKLEDMPMKENVAVE
NSFQNSSEPKLYIMSEKQNNGSGNQVTDDLARELKEISSSFNLDVDMEEDDDSMIRDAGE
KNTEEEDEDFIPGADFSFESRPKYKSVKGNRIKKGKVYRRETDMKLICQYCDRPFEEEAL
KLAHEAVHTDINTARQGKGKGLLGCKFCSKLFVDQSKLGRHLRIHTEERPFVCQTCNKAF
FRMDHLQRHEKMHTIEGAADVDLEQWNQCHICEDEFETIEELDVHSSIHSVEKADGRVDS
LIHLCSFCDEYFTDMNDLQAHVDQQHPKCPQLFKCSFCPSSFTHLSAQLDHQCYCDENPS
PISLVNGSKKTDVDVIDFLNTHSVCKSCGLRFESKQELTKHEFEIHQLGEFSCKTCELTF
TDQNELDLHVTSFHEAVESLSATSKKSPKFSARKYAYVKQGKAIHQCKHCSESFSSIRDY
LIHMRKHTSNHEENACFVCEEKFPTEQSLTEHMADHNDVVVEVGIPKNVEPEQLE
Nucleotide sequence
Length: 3,163
>KH2012:KH.C1.203.v1.A.SL1-1
ATTATAGTTGTGCACATTGCCACATTTTATAAAATATGAATAAAAAGATTAACATTTGCA
AGATATGCGACAAGCGTTTTTCAAGTCATGCAAATCTTGTCAACCATATGAAAACGCATC
AGAAAGGAAATGTGTATTTGAAAGCTGAAGAAGGAAACAAAGAATCTGATCCTAAAGTGG
AGATGAAACCGAAGAAGAAAAGGAGAAAGATGATGGACCGACTGCAGGAGCCAAAGGTGT
ACACCTGCGATATCTGCAGCAAGGCATTTAAAACAAATTTTAAGTTAGTACGCCACTCTT
ACATTCACTTGGAGGTAAAACCATTTCCATGCGAGATGTGTGGGCGCAGGTTTAGCAGAA
AAGATCACCGTAATGTTCACTATAAACTACATTACATTGAAAACAAAAACTGCACATGTC
GAGTATGTGGACAGCTCTTCCATTCTGAGGCTAATGTGGTTAAGCACATTCAAAGGGTCC
ATAACGCTAATAATGAGCATGAAGATGTAATTTGCTATGATTGCGGTGAAACTTTTCAAT
ATCAAGCTCAGTTAAAGCGCCACTACAATCTCTACCATAAGCTAAGATATTATTGCGAGA
TTTGTGGCTGTGAATCTCTATCTGATACTTCCTACCGCCGTCATATTAAAAAGCACGTTC
TCAGTTTGCCGTATACATGCGTAATGTGCCACAGTAACTTTCTGTCTGTGGATGCCATGA
GACAGCATTACTGTGATGCAGAGCTGAGTACTCCAGTAGCCGATGTTGTGGTCAGAGTAA
TTGTTCGGGATTCCATCGATTTGGAAGAGGAAATTCAACCTTCGGATCAGCTGCTGGCTC
TGAAGTTGGAAAAGAAGTTTGACAATCGAGGTCGCAAATGTAAATATCCCAAACTGGAAG
ACATGCCGATGAAAGAAAATGTAGCTGTAGAAAATAGTTTTCAAAATTCTTCTGAACCAA
AGTTGTACATTATGTCAGAGAAACAAAACAACGGAAGTGGTAATCAAGTTACAGATGACC
TTGCTCGGGAACTTAAAGAAATTAGTTCCTCGTTTAATTTGGATGTTGACATGGAAGAAG
ATGACGACTCTATGATCAGGGATGCGGGTGAGAAGAACACGGAGGAAGAAGATGAAGATT
TCATCCCAGGAGCCGATTTTTCTTTTGAGTCAAGGCCAAAATACAAAAGTGTCAAAGGGA
ATAGAATAAAGAAAGGAAAAGTTTATAGAAGGGAAACAGATATGAAATTAATTTGCCAAT
ATTGTGATCGGCCATTTGAAGAAGAAGCATTAAAACTTGCCCATGAAGCAGTTCATACTG
ATATAAACACTGCAAGACAGGGTAAAGGAAAAGGTTTGCTGGGCTGCAAGTTTTGCTCAA
AGCTGTTTGTTGACCAGTCTAAGCTTGGTAGGCACTTGAGGATACACACAGAAGAACGGC
CATTTGTGTGCCAGACCTGCAACAAAGCATTTTTTCGCATGGACCACTTGCAAAGACATG
AAAAAATGCACACGATTGAAGGAGCAGCAGATGTGGATTTGGAACAATGGAATCAGTGCC
ATATTTGTGAGGATGAATTTGAAACTATAGAAGAGCTGGATGTTCATAGTTCAATTCACA
GTGTGGAGAAAGCAGATGGCCGTGTTGATTCTTTGATTCATTTGTGTAGTTTTTGTGATG
AATATTTCACAGACATGAATGATCTACAGGCTCATGTTGACCAACAGCATCCTAAGTGTC
CTCAGCTTTTCAAATGTAGTTTCTGCCCCAGCAGTTTTACCCATCTATCTGCTCAGCTTG
ACCATCAGTGTTATTGCGATGAAAATCCATCTCCTATTAGTTTAGTCAATGGAAGTAAGA
AGACTGATGTAGATGTGATTGATTTCTTAAACACGCATAGTGTTTGCAAATCATGTGGAT
TAAGATTTGAGTCCAAGCAAGAGCTCACAAAACATGAGTTTGAAATTCATCAACTGGGAG
AATTTTCCTGCAAAACCTGTGAATTGACCTTCACTGACCAAAACGAATTGGACCTGCATG
TCACATCATTTCATGAGGCGGTGGAATCCTTATCAGCTACCTCTAAGAAAAGTCCTAAGT
TTTCAGCTCGCAAATATGCGTATGTCAAACAAGGCAAGGCGATACACCAATGCAAACATT
GTTCCGAGTCTTTTAGTTCAATTCGTGATTATCTCATTCATATGAGAAAACACACATCCA
ATCATGAAGAGAATGCTTGCTTTGTGTGTGAGGAAAAATTCCCAACTGAGCAATCCCTCA
CTGAACACATGGCTGATCATAATGATGTCGTGGTTGAAGTAGGAATACCCAAGAATGTTG
AACCTGAACAGTTGGAGTGAGGTGTTTAAAAAGCAGAATTTACATTCAGGGATTTAACCT
AATTTTGGTTGCTGTTGTGTTCCGAAAATAATGTGCCATTTGCTCATTTACATATGTGGC
GCTTTTTGGCTTATGAAGTACTCCTCGTGTTTGTTATATCTGAATAGTTAAGGTGTTTAT
TTCGTTGCGACATGTTACATTGTTGTTATTATGACTTAAGCATTATTGTGTACATTTCCC
TCAAATTAGGAACAAATATAACATTTATTGTAGTTGTAGAAGTTGGGTAAATATTAACTT
CTACCCTGTACTGCCTTAAAAGTGCTGTTGTGTGCTATATCATTATTTCACTCATTAGCA
AACGTGTTAATATAACCTAATGGTAGCATTGCAAACTATTTGTATATAAACTCAAGTTTG
TACAGCTTTTTCAACAAAATATTCAAGTTTTTCTCATAGTTTTGTTTTTTGACCACATAA
AAAGGAGTAACAAGGAATATTGTACTATGAAATATGAATATGTTAAAGATTTTGTTAAAG
GAACTATGTTCTTAACGATCCAATTCTAACATAAATGCATCAGGTATACCGGAAAAGGTT
TAAAAACAGCAGTTGATATTGCAGTCCCCGATAGATTATTAAGCATCCCGATTTCTATTC
GAGTAACGGACAGACATTTCTCTTTTCCATCCACGGCATGCGCATGGCCAACATGGCGGA
GTTTTGGTCGCAGCTGTCTTTTGTGTTGAGGCGTTAAAGTTTGCATGATTTCGTTTAATT
ATCTAGTTCATGTGTAATTAAAGGCATCTGTGTTTATCTGCAG
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[3-35] 8.2E-6 - T[66-116] 1.24E-13 - T[184-232] 4.15E-5 - T[445-493] 2.22E-14 - T[624-670] 6.53E-6 - T[704-756] 3.41E-6 |
| SMART |
Znf_C2H2_type (IPR013087) - T[7-29] 5.0E-4 - T[70-92] 0.0033 - T[98-120] 0.021 - T[127-150] 0.23 - T[159-182] 1.4 - T[186-208] 0.59 - T[214-234] 290.0 - T[406-428] 9.0 - T[443-465] 0.27 - T[471-493] 0.014 - T[507-529] 3.2 - T[543-566] 0.11 - T[573-593] 220.0 - T[623-646] 1.8 - T[651-674] 0.21 - T[705-727] 0.0071 - T[734-756] 0.082 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[7-29] 10.221 - T[70-97] 12.612 - T[98-125] 11.635 - T[127-155] 9.723 - T[159-182] 9.619 - T[186-213] 8.517 - T[443-470] 13.879 - T[471-498] 12.778 - T[507-534] 9.536 - T[623-646] 8.871 - T[651-679] 9.12 - T[705-732] 10.471 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[9-29] . - T[72-92] . - T[100-120] . - T[127-150] . - T[161-182] . - T[408-428] . - T[445-465] . - T[473-493] . - T[509-529] . - T[545-566] . - T[625-646] . - T[653-674] . - T[707-727] . - T[736-756] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN808_HUMAN | 23.669 % | 130 | 5.17E-31 |
| ZN420_HUMAN | 24.831 % | 121 | 1.98E-28 |
| Z780B_HUMAN | 24.029 % | 121 | 2.23E-28 |