- Transcript 'KH2012:KH.C12.219.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.219.v1.A.ND1-1
Possible name(s)
RNASEH1
Gene model
Location
KhC12 [5,254,918 / 5,257,506]
Amino acid sequence
Length: 274
>KH.C12.219.v1.A.ND1-1
TAIMKSFYAVHIGKSPGVYDTWPECLAQVSKFKGAKYKKFSNKDEASYFAHTGTELSKDK
SDILDIFKDELADNSAKESKPNNIPQSSIVSRKRKVKPDSNSRFGKVQKTNDQPTNDSSD
GSCPVVYTDGACSKNGRKGSRAGYGVWWGDDHKLNFSARLPGIPTNQRAEIAAVNKAIKQ
AIDVGHKQLLIRTDSKFVIDCITKWVQGWIRKGWVKADGKPVIHKVEFQEMLKNMKKINV
KFEHVFGHRGNYGNEMADKLAVQGATMPYLLNIG
Nucleotide sequence
Length: 1,373
>KH2012:KH.C12.219.v1.A.ND1-1
AACTGCAATCATGAAATCGTTTTATGCTGTACACATCGGGAAATCGCCAGGTGTTTACGA
TACGTGGCCTGAATGCCTGGCGCAAGTTTCTAAGTTTAAAGGCGCAAAATATAAAAAGTT
TTCCAACAAAGACGAAGCGTCTTACTTCGCGCATACAGGAACCGAACTAAGCAAAGATAA
ATCCGATATTTTGGACATTTTTAAAGATGAATTGGCCGACAATTCTGCAAAAGAATCAAA
GCCAAATAATATTCCACAAAGCTCAATTGTATCGCGCAAACGAAAAGTAAAACCCGATTC
AAATTCTCGTTTTGGAAAAGTTCAAAAAACGAACGATCAGCCAACTAATGATTCATCCGA
TGGTAGTTGCCCTGTTGTTTACACTGATGGTGCTTGCTCTAAAAATGGAAGGAAAGGAAG
CAGAGCTGGATATGGTGTGTGGTGGGGTGATGACCATAAACTGAACTTTTCAGCCAGACT
CCCTGGTATCCCTACGAACCAAAGAGCTGAAATAGCAGCCGTGAACAAAGCTATAAAACA
AGCCATTGATGTTGGTCATAAACAACTATTGATTCGAACAGATTCCAAATTTGTGATCGA
TTGTATAACGAAGTGGGTGCAAGGTTGGATTAGGAAAGGTTGGGTTAAGGCTGACGGGAA
ACCTGTAATTCATAAGGTTGAGTTTCAAGAAATGTTAAAAAACATGAAAAAAATAAACGT
TAAATTTGAGCACGTTTTTGGCCATCGTGGTAACTATGGAAACGAAATGGCGGATAAGTT
GGCCGTGCAGGGAGCGACAATGCCGTACTTACTGAACATTGGGTAAACTTTGGTATGTTT
GATACTTTAGAAATTGTCTTTTCTGTTGAAATATTGTTTTGTTCTTACAATGTTAAAACT
AAGTGTGATTAAGCTTCTGGCGATTTATTTTTTACTTTTTTCTACAATACTTATTTTCAA
TTTTTCAATTTGCTTTGTTAAGTGAAATGTTTTGCTGTTTGGTGAATTTTTCACAACTCT
GTTATCGTATTTCTACTGTGCCGTTTTTTGCTCCTAATGTTGATGCTGCCATCACACAAT
TCCTATTCAGTGCTTCTTAACTTTAAACATTTGAAATTAAATTAATTTTTTTGGAAAGCA
TAAATGAATAACCAAGTTTTGGCTTTTTCATTTCAAAAAACTACATTTCAAACACTTTTC
TTTACCTAAAATGATTGTTACAAAAATAATCAAAATAGTTTGTGAACAACTGTATTACGC
AATCAAATGATGACCCAGGGATTTATAAGCACTGATATAATGTTACATCATGTTTTCATA
TTTTGTTGAAATACTATGACATGTCACTGCTTTATTTAACTAAATTCTTACAG
| PIRSF |
RNase_H1_euk (IPR017067) - T[2-269] 5.8E-78 |
| Gene3D |
RNase_H1_N_sf (IPR037056) - T[4-53] 2.2E-19 |
| SUPERFAMILY |
Ribosomal_L9/RNase_H1_N (IPR009027) - T[5-49] 9.94E-13 |
| Pfam |
RNase_H1_N (IPR011320) - T[7-49] 4.0E-19 |
| Gene3D |
RNaseH_sf (IPR036397) - T[117-267] 9.1E-53 |
| ProSiteProfiles |
RNaseH_domain (IPR002156) - T[120-266] 25.3 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[123-270] 4.68E-44 |
| Pfam |
RNaseH_domain (IPR002156) - T[125-265] 1.6E-40 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RNH1_HUMAN | 40.433 % | 179 | 3.16E-55 |