Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C12.219.v2.A.SL2-1

Possible name(s)

RNASEH1

Gene model

KH2012:KH.C12.219

Location

KhC12 [5,255,543 / 5,257,506]

Sequences

Amino acid sequence

Length: 158

>KH.C12.219.v2.A.SL2-1
DSSDGSCPVVYTDGACSKNGRKGSRAGYGVWWGDDHKLNFSARLPGIPTNQRAEIAAVNK
AIKQAIDVGHKQLLIRTDSKFVIDCITKWVQGWIRKGWVKADGKPVIHKVEFQEMLKNMK
KINVKFEHVFGHRGNYGNEMADKLAVQGATMPYLLNIG

Nucleotide sequence

Length: 1,026

>KH2012:KH.C12.219.v2.A.SL2-1
CAGATTCATCCGATGGTAGTTGCCCTGTTGTTTACACTGATGGTGCTTGCTCTAAAAATG
GAAGGAAAGGAAGCAGAGCTGGATATGGTGTGTGGTGGGGTGATGACCATAAACTGAACT
TTTCAGCCAGACTCCCTGGTATCCCTACGAACCAAAGAGCTGAAATAGCAGCCGTGAACA
AAGCTATAAAACAAGCCATTGATGTTGGTCATAAACAACTATTGATTCGAACAGATTCCA
AATTTGTGATCGATTGTATAACGAAGTGGGTGCAAGGTTGGATTAGGAAAGGTTGGGTTA
AGGCTGACGGGAAACCTGTAATTCATAAGGTTGAGTTTCAAGAAATGTTAAAAAACATGA
AAAAAATAAACGTTAAATTTGAGCACGTTTTTGGCCATCGTGGTAACTATGGAAACGAAA
TGGCGGATAAGTTGGCCGTGCAGGGAGCGACAATGCCGTACTTACTGAACATTGGGTAAA
CTTTGGTATGTTTGATACTTTAGAAATTGTCTTTTCTGTTGAAATATTGTTTTGTTCTTA
CAATGTTAAAACTAAGTGTGATTAAGCTTCTGGCGATTTATTTTTTACTTTTTTCTACAA
TACTTATTTTCAATTTTTCAATTTGCTTTGTTAAGTGAAATGTTTTGCTGTTTGGTGAAT
TTTTCACAACTCTGTTATCGTATTTCTACTGTGCCGTTTTTTGCTCCTAATGTTGATGCT
GCCATCACACAATTCCTATTCAGTGCTTCTTAACTTTAAACATTTGAAATTAAATTAATT
TTTTTGGAAAGCATAAATGAATAACCAAGTTTTGGCTTTTTCATTTCAAAAAACTACATT
TCAAACACTTTTCTTTACCTAAAATGATTGTTACAAAAATAATCAAAATAGTTTGTGAAC
AACTGTATTACGCAATCAAATGATGACCCAGGGATTTATAAGCACTGATATAATGTTACA
TCATGTTTTCATATTTTGTTGAAATACTATGACATGTCACTGCTTTATTTAACTAAATTC
TTACAG

InterProScan

Gene3D	RNaseH_sf (IPR036397) - T[3-151] 1.5E-53
ProSiteProfiles	RNaseH_domain (IPR002156) - T[4-150] 25.3
SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[7-154] 7.97E-45
Pfam	RNaseH_domain (IPR002156) - T[9-149] 2.8E-41

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RNH1_HUMAN	51.773 %	142	2.1E-42