- Transcript 'KH2012:KH.C11.151.v3...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C8.640.v1....' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C12.44.v1....'
Transcript Model
Transcript Id
KH2012:KH.C12.44.v1.A.SL1-1
Possible name(s)
POLR2I; POLR3K; ZNRD1
Gene model
Location
KhC12 [2,764,560 / 2,765,859]
Amino acid sequence
Length: 136
>KH.C12.44.v1.A.SL1-1
AKIGSTISDKMEGTTTAGPGFVGIKFCQECNNMLYPKEDKQNKILLYSCRNCDFQMEADN
LCIYVNKIVHEVDELTQIIADVAQDPTLPRTRDHSCPKCHHKEAVFFQSQSTRDEEGMRL
YFVCTNPHCGHRWTQL
Nucleotide sequence
Length: 1,299
>KH2012:KH.C12.44.v1.A.SL1-1
CGCAAAAATTGGGAGCACTATTAGTGATAAAATGGAGGGTACAACTACTGCTGGGCCTGG
CTTTGTTGGAATTAAGTTTTGCCAAGAATGTAATAACATGCTGTACCCTAAAGAAGACAA
ACAGAACAAGATATTACTGTACTCATGCCGTAACTGTGATTTTCAAATGGAGGCCGACAA
TTTGTGCATCTATGTGAATAAAATCGTGCACGAAGTTGACGAGTTGACACAAATTATCGC
GGACGTCGCACAGGACCCAACCCTGCCTCGGACGCGTGACCACTCATGCCCAAAGTGTCA
CCACAAGGAGGCAGTGTTTTTCCAATCGCAGTCGACGAGAGATGAAGAAGGGATGAGACT
TTATTTCGTTTGTACCAACCCTCATTGTGGGCATAGGTGGACACAATTGTAATGTGTTGG
AATAAGTCTTTGAACTGTTCTCTTATTTAAGAGTAAGAGTGAAAAGAATTGCCCAATCCT
CTGTGCAGAATTTTTTTTTTTTCGACAAATTGCGCAATTTGCTAATTCTTGAGAAAATCC
ATAAAAAATCTAAGATTGTTTGTAATTAATAGTTAATACTGCCTTGATAACTTAGCTAAA
AAATTGGCGCAAATCTGTGCAAAAAAACAAACTTTCCAATCTGGTTCAGGAGATAAATTT
TTGTTTGTTGGGCCAAATTGGCAATATACTTGTCAAAAACAATCCTATAGGTTCTTCTTT
CAAATCGCTGAAATGAGGAGTTTGAATTTAAATTTTGATTCATTTCAAATAGATGGTTCA
GCGAAGAAGATGATAAAATATTGACGAGTTTTTCTGATGTGTCAGAATCACAACTTTTAT
TTAAATCAATCATACCTAGACAGGGTTTTATTAAGTCTTAACTGCTACCTTAATGTTTAA
ACTTCAAACAGTTTATTTTTAAAATGTACTTTTCTTTTCACTTTAGAAACAATTTCCATT
TGTATTGCGTCTTTGGGTAAAACATTTTCAAATATGCAATTTTCTGAAGTAAAATTTCAA
CAGAATAAAAAGTAAAATGTCCCTTCAACTTCAAGAGATGTGAAAATAAGCTCATATAGA
ATTGTACAATATTGTTAACCTAATATCCATGTTATTTTTTGTATCTTAAAAAAAAATTTA
AACTGGTTTCTGTTTTATTTTGTAATACATGTGCGTTTGTAACTCTTTTTGGGATTTTGA
TTACTGAATACTGCCATCTGCCATATACAAAATTTTCCCGATCTTTTAAACTAATGGTTA
AATTTTACAGTACCATATATAAGATTTTTCACTTTTCAG
| PIRSF |
Rpa12/Rpb9/Rpc10/TFS (IPR012164) - T[24-135] 7.1E-21 |
| Pfam |
DNA-dir_RNA_pol_M/15kDasu (IPR001529) - T[24-59] 6.1E-13 |
| SMART |
DNA-dir_RNA_pol_M/15kDasu (IPR001529) - T[25-78] 8.0E-20 |
| ProSitePatterns |
DNA-dir_RNA_pol-M_15_CS (IPR019761) - T[26-52] . |
| CDD |
Zn_ribbon_RPB9_C (IPR034012) - T[84-134] 4.63767E-29 |
| ProSiteProfiles |
Znf_TFIIS (IPR001222) - T[92-134] 13.946 |
| Pfam |
Znf_TFIIS (IPR001222) - T[94-134] 4.3E-13 |
| SMART |
Znf_TFIIS (IPR001222) - T[94-135] 2.9E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RPB9_HUMAN | 79.2 % | 217 | 1.22E-74 |