- Clone 'cien47979' >
- Clone 'CCAO12074' >
- Clone 'citb1h12' >
- Clone 'cien105702' >
- Transcript 'KH2012:KH.C13.137.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.137.v1.A.SL1-1
Possible name(s)
DHX16; DHX8
Gene model
Location
KhC13 [1,664,128 / 1,668,452]
Amino acid sequence
Length: 1,186
>KH.C13.137.v1.A.SL1-1
IMDELEKLEYLSLVSKVCTELDNHLGMNDKDLAEFIISIADKHPSLPKFSKVLKKKGAEF
PETFTKNLLSLIQRMRPPKKKKGKEGEEILVETDDGRGKYKLMFPALCRADDAPVLPEPP
KITEVDTKDAEDTMNELENLLAPREERKKGRGGSPHRSRDRERESSTRRSRHDRDDSRSR
RDRSRSPHSKRSRDDRRRDGRDHSRSRRRSPSSRRRTPSPERSRRQIPEEPTPGDIFEGR
VTSIMQFGCFVQLEGLRKRIEGLVHISELRAEGRVSQVSDVVKRGQKCKVKVISFTGTKT
SLTMKDVDQITGEDLNPGRTSRMKKPKIKDEELIGRNPDRPSDLQVSDVQDRSDSPKRIN
KMSDMERWEIKQMVSAGCMDVTELPEFDEESGVLPKADSDNEDLEIELVEEEPPFLNGHT
NQSIDLSPVRIVKNPDGSLSKAAMMQGALAKERKEIKQQQREAELESEPTTSTKSWIDPM
PKEENPAASTSKSVSMIQGDIPEWKKHAFGGAKASYGKKTELTIIEQRQSLPIYKLKEQL
VQAIHDNQVLIVIGETGSGKTTQITQYIAEAGYTVRGKIGCTQPRRVAAMSVAKRVSEEF
GCRLGQEVGYTIRFEDCTSQETKIKYMTEGMMLRECLIDFELNQYSVIMLDEAHERTVQT
DVLFGLVKKYVQSRKDLKLIVTSATLDAVKFSEYFFGAPIFTIPGRTFPVEIMYTKDPEP
DYLDASMITVMQIHLTEPPGDILLFLTGQEEIDTSCEILFERMKSLGPEVPELIILPVYS
ALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQNVYNSKTGIDQL
VVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLATAVPELQRTNLTATVLSLKA
MGINDLLSFDFMDPPPMETLVTAMEQLYQLSALDDEGLLTRLGRRMAEFPLEPMLCKMLI
MSVHLGCSDEILTVVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDQLTLLAVYNSWKN
NKFSNPWCYENFIQARTLRRAQDVRKQMLGIMDRHKLDVVTCGKNTAKIQKAICSGYFRN
AAKKDPQEGYRTLVDQQVVYIHPSSALFNRQPEWIIYHELVLTTKEYMREVTAIDPKWLV
EFAPKFFKMGDPTKLSKQKKQLKLEPLYNRYEEPNSWRISRAYRRR
Nucleotide sequence
Length: 4,115
>KH2012:KH.C13.137.v1.A.SL1-1
GTTATCGTAGAAATAAATCATGGATGAATTAGAAAAGCTTGAATATTTGTCCCTGGTGTC
TAAAGTATGCACGGAGCTCGACAATCATCTTGGAATGAACGATAAAGATCTTGCAGAGTT
TATTATTTCTATTGCTGACAAACACCCATCCCTGCCCAAGTTCTCTAAAGTTTTGAAGAA
AAAAGGGGCAGAGTTTCCGGAGACTTTCACCAAAAATTTACTCTCTCTCATTCAGAGAAT
GCGGCCTCCAAAAAAGAAAAAAGGCAAAGAAGGAGAAGAGATTCTCGTTGAAACGGACGA
CGGAAGAGGGAAATATAAACTCATGTTCCCGGCTCTGTGTCGTGCGGACGACGCTCCTGT
TCTTCCTGAGCCTCCAAAGATAACAGAAGTGGACACCAAGGATGCAGAAGACACAATGAA
CGAGTTGGAGAACCTCCTCGCTCCTAGAGAAGAGAGGAAAAAGGGAAGAGGCGGTTCCCC
GCATCGATCCAGGGATCGGGAGAGAGAATCTTCTACAAGGAGATCCAGGCATGATAGAGA
TGATTCAAGGTCACGTCGTGATCGTTCCAGATCTCCACATTCTAAAAGATCCAGAGATGA
TCGGAGAAGAGATGGAAGAGATCACTCAAGATCTAGAAGGAGATCCCCATCATCTAGGAG
GAGAACCCCATCACCTGAGAGATCCAGGAGGCAAATACCAGAGGAGCCGACTCCAGGAGA
CATTTTCGAAGGGAGAGTGACTTCTATCATGCAGTTTGGATGTTTTGTTCAACTTGAAGG
GTTAAGAAAAAGGATTGAGGGTTTGGTTCATATATCGGAGCTGAGGGCTGAAGGGAGGGT
CTCACAAGTATCTGATGTTGTAAAAAGAGGACAGAAATGTAAAGTTAAAGTGATCAGTTT
TACTGGAACCAAGACCAGCCTCACAATGAAGGATGTAGATCAGATAACTGGGGAGGATTT
GAATCCCGGGAGAACCTCTAGGATGAAGAAGCCTAAGATCAAAGATGAGGAGTTAATTGG
GAGGAACCCGGATCGTCCAAGTGATCTTCAGGTCTCGGATGTCCAGGATAGATCAGATTC
TCCCAAGAGGATAAATAAGATGTCTGATATGGAAAGATGGGAGATCAAACAGATGGTGTC
TGCAGGTTGTATGGATGTAACTGAACTTCCTGAGTTTGATGAGGAGAGCGGCGTCCTCCC
GAAGGCTGATAGCGATAACGAGGATCTTGAGATTGAATTAGTTGAAGAGGAACCTCCGTT
TTTGAACGGGCATACCAACCAGAGCATTGACCTTAGCCCTGTGAGGATTGTTAAGAATCC
TGATGGATCCTTATCCAAAGCAGCCATGATGCAAGGCGCTCTTGCTAAAGAGAGGAAAGA
GATCAAACAACAGCAGCGAGAAGCGGAGTTAGAATCAGAGCCAACCACCTCAACTAAGAG
CTGGATTGACCCGATGCCGAAGGAAGAGAATCCAGCCGCTTCTACTTCTAAAAGTGTGAG
CATGATACAGGGTGATATACCTGAGTGGAAGAAGCATGCTTTTGGTGGAGCAAAGGCTTC
TTATGGGAAGAAGACGGAGTTAACGATCATTGAACAGAGGCAGAGTCTTCCTATTTATAA
ATTAAAGGAGCAATTAGTTCAAGCTATTCATGATAATCAAGTTTTGATCGTTATCGGTGA
AACTGGGTCGGGAAAGACAACACAAATCACTCAATATATTGCAGAAGCTGGTTACACTGT
GCGGGGTAAGATTGGTTGCACGCAGCCGAGAAGGGTTGCTGCTATGTCTGTTGCTAAAAG
AGTTTCTGAAGAATTTGGTTGCAGACTTGGACAAGAGGTTGGGTATACCATTCGGTTTGA
AGATTGCACAAGCCAGGAAACAAAGATTAAATACATGACTGAAGGTATGATGTTGAGGGA
ATGTTTGATTGACTTCGAATTAAACCAATACTCAGTTATTATGTTGGATGAGGCTCATGA
ACGTACTGTTCAAACTGATGTCCTGTTTGGGCTTGTGAAGAAATACGTTCAGTCCCGGAA
AGATTTGAAATTAATCGTAACTTCAGCAACATTGGATGCCGTTAAGTTTTCAGAGTATTT
CTTCGGCGCGCCTATTTTCACAATTCCTGGTCGCACGTTCCCAGTCGAGATTATGTACAC
TAAAGACCCTGAACCGGATTATTTAGACGCGTCCATGATCACAGTGATGCAGATCCATCT
TACCGAACCTCCAGGTGATATCTTGCTCTTCTTAACTGGACAGGAGGAGATCGATACATC
ATGCGAGATCCTTTTTGAAAGGATGAAGTCCTTAGGTCCGGAGGTACCGGAGCTTATCAT
CCTCCCTGTTTACTCCGCTCTTCCATCCGAGATGCAAACGAGGATCTTTGATCCTGCTCC
TCCCGGGAGTAGGAAGGTTGTCATAGCAACCAACATTGCCGAGACTTCTCTCACAATAGA
CGGAATATATTACGTGGTTGATCCTGGTTTTGTGAAGCAGAATGTTTACAACAGTAAGAC
AGGAATTGATCAGCTCGTGGTCACGCCTATATCGCAAGCACAAGCAAAACAACGTGCAGG
TCGTGCTGGACGTACAGGGCCAGGTAAATGTTATCGATTATATACAGAGCGTGCATATAG
AGATGAAATGCTTGCAACTGCAGTACCAGAGTTACAACGGACTAATCTAACAGCAACTGT
CTTATCTTTAAAAGCAATGGGGATAAATGATCTTCTGTCTTTTGACTTCATGGACCCCCC
GCCCATGGAGACTTTGGTTACAGCTATGGAACAACTTTACCAGTTAAGCGCTTTGGATGA
TGAAGGGTTATTGACAAGGTTGGGTAGAAGAATGGCTGAGTTTCCACTAGAACCCATGCT
ATGTAAGATGTTAATTATGTCAGTTCATCTTGGTTGTAGTGATGAGATACTCACTGTGGT
TTCAATGCTGTCTGTACAGAATGTGTTTTATCGGCCAAAAGATAAACAAGCGTTGGCGGA
TCAGAAAAAAGCAAAGTTTCATCAAACGGAAGGAGACCAGTTGACTCTGCTTGCTGTGTA
TAATTCCTGGAAAAATAATAAGTTTAGTAACCCCTGGTGTTATGAGAACTTTATCCAAGC
TCGTACGCTTAGGAGAGCACAAGATGTTCGGAAACAAATGTTGGGGATTATGGATCGCCA
TAAACTTGATGTCGTGACTTGTGGAAAAAACACTGCTAAGATACAGAAAGCGATTTGCAG
CGGGTACTTTAGAAACGCAGCGAAAAAAGACCCACAAGAAGGTTATAGGACTCTTGTTGA
CCAACAGGTTGTTTATATACATCCTAGCAGTGCTTTGTTCAACAGGCAGCCAGAATGGAT
TATATATCATGAGTTAGTGTTAACCACCAAGGAATACATGCGTGAAGTTACAGCAATTGA
TCCAAAATGGTTGGTTGAGTTCGCACCGAAGTTTTTCAAGATGGGAGACCCGACCAAGCT
AAGTAAGCAGAAGAAACAGCTGAAGTTGGAGCCACTTTATAACAGATATGAAGAACCAAA
CTCATGGAGAATATCAAGGGCGTACAGGAGAAGATAGTTCAATTTAAACTTCATAAAAAC
TCATGCTTTTCAATTCTTTTTTTATAAAGACTAGTCGCCTTTTTGGTCAATTTTGTAAAA
CTTTTTAATGAATTGAACATTTTTCATAATGTTTAAAGACAGTATCGAACTATATATAAT
TAATTTTCTGAAATAACAATTTAAGTTTTGTGTATTGGATTAAACAGTGATACATTTTGC
TAGTTTTCGCCAAAATTTTAATCAAGAAAGCAAAATTTCATAAATATTTTGACTTTAATC
TAACTCTTGTGTTCCAAATGTTTGTATTTTTCCAGTACAAACACAAAGATATCTTGTTAT
TTTCTACTTTTAAGCTCCTAAAGCTAAACACTCAATCATACACCCTGTTTTGAAGTAAAG
AAACACGAATATTACATGCCGTTTCCATATATAAACATCATGTTCCATTTAAACCAATCT
ACCAATCGCATTTCATTTTTTCTAAAACTTCTGAATTGGTCAGTTTATGCCACCCTATTC
AAACCATTGACCACAATTGTGCTTAAACTTTTTAG
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[227-307] 2.54E-14 |
| Pfam |
S1_domain (IPR003029) - T[230-300] 1.5E-13 |
| SMART |
S1_dom (IPR022967) - T[232-305] 3.0E-16 |
| ProSiteProfiles |
S1_domain (IPR003029) - T[234-305] 17.411 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[527-1145] 1.22E-134 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[529-713] 2.4E-31 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[537-687] 3.6E-8 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[541-704] 19.06 |
| ProSitePatterns |
DNA/RNA_helicase_DEAH_CS (IPR002464) - T[646-655] . |
| CDD |
Helicase_C (IPR001650) - T[711-868] 1.03762E-13 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[722-902] 17.211 |
| Pfam |
Helicase_C (IPR001650) - T[733-861] 5.8E-13 |
| SMART |
Helicase_C (IPR001650) - T[757-861] 7.6E-19 |
| SMART |
Helicase-assoc_dom (IPR007502) - T[922-1012] 2.1E-37 |
| Pfam |
Helicase-assoc_dom (IPR007502) - T[923-1011] 2.6E-23 |
| Pfam |
DUF1605 (IPR011709) - T[1069-1145] 2.8E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX8_HUMAN | 80.809 % | 1643 | 0 |
| DHX16_HUMAN | 56.347 % | 788 | 0 |
| PRP16_HUMAN | 46.535 % | 762 | 0 |