- Transcript 'KH2012:KH.C2.141.v1....' >
- Transcript 'KH2012:KH.C2.141.v2....' >
- Transcript 'KH2012:KH.S621.5.v1....' >
- Clone 'cima879037' >
- Transcript 'KH2012:KH.C13.156.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.156.v1.A.nonSL3-1
Possible name(s)
ELP2; NLE1; WDR33
Gene model
Location
KhC13 [1,773,935 / 1,776,036]
Amino acid sequence
Length: 591
>KH.C13.156.v1.A.nonSL3-1
YNLNGDILELEKVEFKLTVCLSGHEDWVRDVDFLSSSGDLILSSCSQDGFVRLWKIQKQK
EIEKNDFSELKMKQQNFEVCGVKYSVCIEAVLSGHENWVYSVQWVHGTQPMLLSASIDKT
VVVWEYDVDCGMWIDKVRVGEVGGNTLGFYGAQCNDKGNQIVAHSHSGALHAWDLKGNGE
WKPAVVVTGHSAPVLDISWEPLHGRYLLTTGDDQTTRVLSQWVRECGFKSWHEIARPQIH
GYDITCLSMMHSLKFVSGADEKVLRVFEAPKNYLENLKSLTGFELIKTDMNHPEGATVPA
LGLSNKAVLAGSKCEKESDRSEQYIENMFIPAVLDRPPPETHLLQNTLWPEVRKLYGHVY
EIFCVACSKDGNLIASAAKSSKPQHAGIIIWDTNIMQQVDTLHGHTLTVTQMEFSPNGNY
LLSVSRDRTWIIHKINKVNSTYEFSIHSKSEKKASHSRIIWSCSWAHDSKLFVTGSRDKK
LMIWEVINDTVNRLCVEDCGQPITAVAFSSKLVSMNYIIAYGLENGRINISLFSTSGSLF
QTISMFNLNFSHCLAVKRLQWKPNVEENSNLVLASCSLDNQVKMFEVLLES
Nucleotide sequence
Length: 2,101
>KH2012:KH.C13.156.v1.A.nonSL3-1
TTTACAACTTAAATGGGGATATATTGGAGTTGGAAAAAGTGGAGTTTAAATTAACCGTGT
GTCTAAGTGGGCATGAGGATTGGGTCAGAGATGTCGACTTTTTATCAAGTTCTGGAGATT
TAATTTTATCAAGTTGTTCGCAGGACGGTTTTGTGCGTTTGTGGAAAATTCAGAAGCAAA
AAGAAATTGAGAAAAATGATTTTTCTGAGTTAAAGATGAAACAGCAGAATTTTGAAGTTT
GTGGAGTGAAGTATTCAGTTTGTATTGAAGCAGTTTTATCGGGGCATGAAAATTGGGTTT
ATAGTGTTCAGTGGGTTCATGGGACACAACCTATGCTGTTATCAGCTTCCATTGATAAAA
CTGTGGTCGTATGGGAGTATGATGTTGACTGTGGGATGTGGATTGATAAAGTTCGGGTTG
GGGAAGTAGGGGGAAATACCCTGGGGTTTTATGGAGCACAGTGTAATGATAAAGGCAACC
AGATAGTTGCCCATAGCCACAGTGGTGCTTTGCATGCATGGGATTTGAAGGGGAATGGAG
AATGGAAACCTGCTGTGGTCGTGACTGGACATTCTGCTCCTGTATTAGACATAAGTTGGG
AACCTTTACATGGGAGATACTTGTTAACTACAGGAGATGACCAAACCACAAGGGTTCTCT
CACAGTGGGTTCGTGAGTGTGGTTTCAAATCATGGCATGAGATAGCAAGACCACAAATTC
ACGGATATGATATCACGTGTTTATCCATGATGCATTCACTGAAATTTGTGTCCGGCGCGG
ATGAAAAAGTTTTGCGGGTTTTTGAAGCCCCGAAAAATTATTTGGAAAATTTGAAAAGCC
TTACAGGGTTTGAGTTGATAAAAACTGATATGAATCACCCTGAAGGGGCAACTGTTCCCG
CTCTTGGTTTGTCCAATAAAGCTGTTCTTGCTGGTAGTAAATGTGAAAAGGAAAGCGACC
GCAGTGAGCAGTATATTGAGAATATGTTTATACCCGCTGTGTTGGATCGACCACCACCTG
AAACGCATCTCTTGCAGAATACACTGTGGCCTGAGGTGCGGAAGTTGTACGGACATGTCT
ATGAAATATTTTGTGTGGCTTGCAGTAAAGATGGAAACTTGATTGCATCAGCTGCAAAGT
CATCCAAGCCCCAACATGCAGGAATAATAATATGGGATACAAATATAATGCAACAGGTTG
ATACATTACATGGGCATACGTTAACTGTCACTCAAATGGAGTTTTCACCCAATGGAAATT
ACCTTCTATCTGTTTCAAGGGACCGGACGTGGATTATTCATAAAATCAACAAAGTCAACT
CAACTTACGAGTTTTCAATCCACAGTAAAAGCGAGAAAAAGGCCTCCCACTCACGGATCA
TATGGTCGTGCTCATGGGCTCATGATAGCAAGTTATTTGTCACGGGATCACGGGATAAAA
AACTCATGATATGGGAGGTGATTAATGATACAGTGAATAGATTATGTGTTGAAGATTGTG
GACAACCAATAACAGCCGTTGCTTTCAGTTCAAAGTTGGTTTCCATGAACTACATTATAG
CATATGGGCTGGAGAACGGTAGAATTAATATTTCTTTGTTTTCAACATCTGGTTCTTTGT
TTCAAACAATCTCAATGTTTAATCTCAACTTCTCCCATTGTTTAGCAGTGAAACGACTTC
AATGGAAACCAAATGTTGAGGAAAATTCAAATCTTGTTTTGGCTTCTTGTAGTTTAGATA
ATCAAGTTAAAATGTTTGAAGTTTTATTAGAAAGTTAATTAAACTAAATTGGATGTATAA
AAAACTATCTTTGGTGCTGTTTAGGCTATATGTCATGTTAGTAGTTTTAATTAATGCAAT
ATCACCTGTTTCAATCAATGAGGTTCCTATGTTTTACAATTGTGTATAACTGTATTTTAA
CAATGTCACCTTAGATTTTGTCTAAAATTCAAAAACCGTTATTATTGCCAACGTTTTAAT
CATATCCCAGTGTCTCATTTCTGCCCTGCTTTTGAACCTTACAATATAAATGAGGTCCCC
AGTTTAAAACCCCCCTAAAATAGCAAAATAATAACATGTTCCCACTTACGTTTTGCTCCA
G
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[6-66] 1.4E-9 - T[79-139] 2.1E-6 - T[144-447] 2.7E-38 - T[448-590] 6.0E-16 |
| PANTHER |
Elp2 (IPR037289) - T[11-587] 3.3E-233 |
| SMART |
WD40_repeat (IPR001680) - T[14-55] 7.7E-6 - T[85-125] 2.2E-6 - T[135-174] 260.0 - T[180-220] 0.013 - T[230-268] 11.0 - T[348-392] 0.0018 - T[395-434] 2.9E-6 - T[447-485] 5.2E-5 - T[536-586] 22.0 |
| Pfam |
WD40_repeat (IPR001680) - T[19-55] 1.9E-4 - T[91-124] 0.0044 - T[397-429] 0.0017 - T[455-484] 2.1E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[21-64] 11.344 - T[92-125] 10.943 - T[402-429] 9.472 - T[453-486] 11.344 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[21-218] 14.793 - T[355-494] 16.19 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[42-56] 5.7E-5 - T[112-126] 5.7E-5 - T[472-486] 5.7E-5 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[90-276] 3.48E-36 - T[353-448] 3.48E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ELP2_HUMAN | 44.182 % | 500 | 1.03E-168 |