- Transcript 'KH2012:KH.C13.156.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.156.v1.A.nonSL4-1
Possible name(s)
ELP2; NLE1; WDR33
Gene model
Location
KhC13 [1,773,473 / 1,776,036]
Amino acid sequence
Length: 745
>KH.C13.156.v1.A.nonSL4-1
KDGIPVTAHVVSTLNHHRGPVGCVKWIRRFSDDGILKTPFLLSGSVDKTITCWKIGIENG
KFDKSEEILAELKGHSGTITAMDGIVVGNRNLISSAGADSCVKIWFHSDNITMVDCVQTI
DFNNGFVHGLSMHMIPNTKVPMLALACDDFKIHIYNLNGDILELEKVEFKLTVCLSGHED
WVRDVDFLSSSGDLILSSCSQDGFVRLWKIQKQKEIEKNDFSELKMKQQNFEVCGVKYSV
CIEAVLSGHENWVYSVQWVHGTQPMLLSASIDKTVVVWEYDVDCGMWIDKVRVGEVGGNT
LGFYGAQCNDKGNQIVAHSHSGALHAWDLKGNGEWKPAVVVTGHSAPVLDISWEPLHGRY
LLTTGDDQTTRVLSQWVRECGFKSWHEIARPQIHGYDITCLSMMHSLKFVSGADEKVLRV
FEAPKNYLENLKSLTGFELIKTDMNHPEGATVPALGLSNKAVLAGSKCEKESDRSEQYIE
NMFIPAVLDRPPPETHLLQNTLWPEVRKLYGHVYEIFCVACSKDGNLIASAAKSSKPQHA
GIIIWDTNIMQQVDTLHGHTLTVTQMEFSPNGNYLLSVSRDRTWIIHKINKVNSTYEFSI
HSKSEKKASHSRIIWSCSWAHDSKLFVTGSRDKKLMIWEVINDTVNRLCVEDCGQPITAV
AFSSKLVSMNYIIAYGLENGRINISLFSTSGSLFQTISMFNLNFSHCLAVKRLQWKPNVE
ENSNLVLASCSLDNQVKMFEVLLES
Nucleotide sequence
Length: 2,563
>KH2012:KH.C13.156.v1.A.nonSL4-1
ATAAAGATGGGATTCCAGTCACAGCCCACGTTGTTTCCACTTTAAACCACCATAGAGGTC
CTGTAGGGTGCGTCAAGTGGATTCGAAGGTTTAGCGATGATGGGATTTTAAAGACGCCAT
TTTTGCTCTCGGGATCAGTAGATAAAACTATCACGTGCTGGAAAATTGGGATCGAAAATG
GAAAGTTTGATAAAAGTGAAGAAATTCTTGCTGAGTTAAAAGGACATAGTGGGACCATCA
CTGCTATGGATGGGATAGTCGTTGGGAATAGAAATCTTATATCTTCAGCTGGTGCTGATT
CTTGTGTTAAAATATGGTTTCATAGCGATAATATAACAATGGTTGATTGTGTTCAAACAA
TTGACTTTAACAATGGGTTTGTCCATGGACTTTCAATGCATATGATACCAAACACTAAGG
TTCCAATGCTGGCACTTGCATGCGATGATTTTAAGATTCATATTTACAACTTAAATGGGG
ATATATTGGAGTTGGAAAAAGTGGAGTTTAAATTAACCGTGTGTCTAAGTGGGCATGAGG
ATTGGGTCAGAGATGTCGACTTTTTATCAAGTTCTGGAGATTTAATTTTATCAAGTTGTT
CGCAGGACGGTTTTGTGCGTTTGTGGAAAATTCAGAAGCAAAAAGAAATTGAGAAAAATG
ATTTTTCTGAGTTAAAGATGAAACAGCAGAATTTTGAAGTTTGTGGAGTGAAGTATTCAG
TTTGTATTGAAGCAGTTTTATCGGGGCATGAAAATTGGGTTTATAGTGTTCAGTGGGTTC
ATGGGACACAACCTATGCTGTTATCAGCTTCCATTGATAAAACTGTGGTCGTATGGGAGT
ATGATGTTGACTGTGGGATGTGGATTGATAAAGTTCGGGTTGGGGAAGTAGGGGGAAATA
CCCTGGGGTTTTATGGAGCACAGTGTAATGATAAAGGCAACCAGATAGTTGCCCATAGCC
ACAGTGGTGCTTTGCATGCATGGGATTTGAAGGGGAATGGAGAATGGAAACCTGCTGTGG
TCGTGACTGGACATTCTGCTCCTGTATTAGACATAAGTTGGGAACCTTTACATGGGAGAT
ACTTGTTAACTACAGGAGATGACCAAACCACAAGGGTTCTCTCACAGTGGGTTCGTGAGT
GTGGTTTCAAATCATGGCATGAGATAGCAAGACCACAAATTCACGGATATGATATCACGT
GTTTATCCATGATGCATTCACTGAAATTTGTGTCCGGCGCGGATGAAAAAGTTTTGCGGG
TTTTTGAAGCCCCGAAAAATTATTTGGAAAATTTGAAAAGCCTTACAGGGTTTGAGTTGA
TAAAAACTGATATGAATCACCCTGAAGGGGCAACTGTTCCCGCTCTTGGTTTGTCCAATA
AAGCTGTTCTTGCTGGTAGTAAATGTGAAAAGGAAAGCGACCGCAGTGAGCAGTATATTG
AGAATATGTTTATACCCGCTGTGTTGGATCGACCACCACCTGAAACGCATCTCTTGCAGA
ATACACTGTGGCCTGAGGTGCGGAAGTTGTACGGACATGTCTATGAAATATTTTGTGTGG
CTTGCAGTAAAGATGGAAACTTGATTGCATCAGCTGCAAAGTCATCCAAGCCCCAACATG
CAGGAATAATAATATGGGATACAAATATAATGCAACAGGTTGATACATTACATGGGCATA
CGTTAACTGTCACTCAAATGGAGTTTTCACCCAATGGAAATTACCTTCTATCTGTTTCAA
GGGACCGGACGTGGATTATTCATAAAATCAACAAAGTCAACTCAACTTACGAGTTTTCAA
TCCACAGTAAAAGCGAGAAAAAGGCCTCCCACTCACGGATCATATGGTCGTGCTCATGGG
CTCATGATAGCAAGTTATTTGTCACGGGATCACGGGATAAAAAACTCATGATATGGGAGG
TGATTAATGATACAGTGAATAGATTATGTGTTGAAGATTGTGGACAACCAATAACAGCCG
TTGCTTTCAGTTCAAAGTTGGTTTCCATGAACTACATTATAGCATATGGGCTGGAGAACG
GTAGAATTAATATTTCTTTGTTTTCAACATCTGGTTCTTTGTTTCAAACAATCTCAATGT
TTAATCTCAACTTCTCCCATTGTTTAGCAGTGAAACGACTTCAATGGAAACCAAATGTTG
AGGAAAATTCAAATCTTGTTTTGGCTTCTTGTAGTTTAGATAATCAAGTTAAAATGTTTG
AAGTTTTATTAGAAAGTTAATTAAACTAAATTGGATGTATAAAAAACTATCTTTGGTGCT
GTTTAGGCTATATGTCATGTTAGTAGTTTTAATTAATGCAATATCACCTGTTTCAATCAA
TGAGGTTCCTATGTTTTACAATTGTGTATAACTGTATTTTAACAATGTCACCTTAGATTT
TGTCTAAAATTCAAAAACCGTTATTATTGCCAACGTTTTAATCATATCCCAGTGTCTCAT
TTCTGCCCTGCTTTTGAACCTTACAATATAAATGAGGTCCCCAGTTTAAAACCCCCCTAA
AATAGCAAAATAATAACATGTTCCCACTTACGTTTTGCTCCAG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[5-173] 1.1E-17 - T[174-288] 6.0E-16 - T[299-598] 5.2E-38 - T[599-744] 7.4E-16 |
| SMART |
WD40_repeat (IPR001680) - T[7-54] 1.5E-4 - T[65-106] 0.056 - T[113-156] 200.0 - T[168-209] 7.7E-6 - T[239-279] 2.2E-6 - T[289-328] 260.0 - T[334-374] 0.013 - T[384-422] 11.0 - T[502-546] 0.0018 - T[549-588] 2.9E-6 - T[601-639] 5.2E-5 - T[690-740] 22.0 |
| PANTHER |
Elp2 (IPR037289) - T[8-741] 1.6E-271 |
| Pfam |
WD40_repeat (IPR001680) - T[11-54] 0.029 - T[68-105] 0.023 - T[173-209] 2.6E-4 - T[245-278] 0.0058 - T[551-583] 0.0023 - T[609-638] 2.8E-4 |
| SUPERFAMILY |
Quinoprotein_ADH-like_supfam (IPR011047) - T[35-115] 4.71E-39 - T[143-281] 4.71E-39 - T[334-404] 4.71E-39 - T[540-644] 4.71E-39 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[41-55] 9.7E-5 - T[266-280] 9.7E-5 - T[626-640] 9.7E-5 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[175-218] 11.344 - T[246-279] 10.943 - T[556-583] 9.472 - T[607-640] 11.344 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[175-372] 14.793 - T[509-648] 16.19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ELP2_HUMAN | 42.356 % | 575 | 0 |