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- Transcript 'KH2012:KH.C13.156.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.156.v1.A.SL2-1
Possible name(s)
ELP2; NLE1; WDR33
Gene model
Location
KhC13 [1,774,078 / 1,776,036]
Amino acid sequence
Length: 544
>KH.C13.156.v1.A.SL2-1
DGFVRLWKIQKQKEIEKNDFSELKMKQQNFEVCGVKYSVCIEAVLSGHENWVYSVQWVHG
TQPMLLSASIDKTVVVWEYDVDCGMWIDKVRVGEVGGNTLGFYGAQCNDKGNQIVAHSHS
GALHAWDLKGNGEWKPAVVVTGHSAPVLDISWEPLHGRYLLTTGDDQTTRVLSQWVRECG
FKSWHEIARPQIHGYDITCLSMMHSLKFVSGADEKVLRVFEAPKNYLENLKSLTGFELIK
TDMNHPEGATVPALGLSNKAVLAGSKCEKESDRSEQYIENMFIPAVLDRPPPETHLLQNT
LWPEVRKLYGHVYEIFCVACSKDGNLIASAAKSSKPQHAGIIIWDTNIMQQVDTLHGHTL
TVTQMEFSPNGNYLLSVSRDRTWIIHKINKVNSTYEFSIHSKSEKKASHSRIIWSCSWAH
DSKLFVTGSRDKKLMIWEVINDTVNRLCVEDCGQPITAVAFSSKLVSMNYIIAYGLENGR
INISLFSTSGSLFQTISMFNLNFSHCLAVKRLQWKPNVEENSNLVLASCSLDNQVKMFEV
LLES
Nucleotide sequence
Length: 1,958
>KH2012:KH.C13.156.v1.A.SL2-1
GACGGTTTTGTGCGTTTGTGGAAAATTCAGAAGCAAAAAGAAATTGAGAAAAATGATTTT
TCTGAGTTAAAGATGAAACAGCAGAATTTTGAAGTTTGTGGAGTGAAGTATTCAGTTTGT
ATTGAAGCAGTTTTATCGGGGCATGAAAATTGGGTTTATAGTGTTCAGTGGGTTCATGGG
ACACAACCTATGCTGTTATCAGCTTCCATTGATAAAACTGTGGTCGTATGGGAGTATGAT
GTTGACTGTGGGATGTGGATTGATAAAGTTCGGGTTGGGGAAGTAGGGGGAAATACCCTG
GGGTTTTATGGAGCACAGTGTAATGATAAAGGCAACCAGATAGTTGCCCATAGCCACAGT
GGTGCTTTGCATGCATGGGATTTGAAGGGGAATGGAGAATGGAAACCTGCTGTGGTCGTG
ACTGGACATTCTGCTCCTGTATTAGACATAAGTTGGGAACCTTTACATGGGAGATACTTG
TTAACTACAGGAGATGACCAAACCACAAGGGTTCTCTCACAGTGGGTTCGTGAGTGTGGT
TTCAAATCATGGCATGAGATAGCAAGACCACAAATTCACGGATATGATATCACGTGTTTA
TCCATGATGCATTCACTGAAATTTGTGTCCGGCGCGGATGAAAAAGTTTTGCGGGTTTTT
GAAGCCCCGAAAAATTATTTGGAAAATTTGAAAAGCCTTACAGGGTTTGAGTTGATAAAA
ACTGATATGAATCACCCTGAAGGGGCAACTGTTCCCGCTCTTGGTTTGTCCAATAAAGCT
GTTCTTGCTGGTAGTAAATGTGAAAAGGAAAGCGACCGCAGTGAGCAGTATATTGAGAAT
ATGTTTATACCCGCTGTGTTGGATCGACCACCACCTGAAACGCATCTCTTGCAGAATACA
CTGTGGCCTGAGGTGCGGAAGTTGTACGGACATGTCTATGAAATATTTTGTGTGGCTTGC
AGTAAAGATGGAAACTTGATTGCATCAGCTGCAAAGTCATCCAAGCCCCAACATGCAGGA
ATAATAATATGGGATACAAATATAATGCAACAGGTTGATACATTACATGGGCATACGTTA
ACTGTCACTCAAATGGAGTTTTCACCCAATGGAAATTACCTTCTATCTGTTTCAAGGGAC
CGGACGTGGATTATTCATAAAATCAACAAAGTCAACTCAACTTACGAGTTTTCAATCCAC
AGTAAAAGCGAGAAAAAGGCCTCCCACTCACGGATCATATGGTCGTGCTCATGGGCTCAT
GATAGCAAGTTATTTGTCACGGGATCACGGGATAAAAAACTCATGATATGGGAGGTGATT
AATGATACAGTGAATAGATTATGTGTTGAAGATTGTGGACAACCAATAACAGCCGTTGCT
TTCAGTTCAAAGTTGGTTTCCATGAACTACATTATAGCATATGGGCTGGAGAACGGTAGA
ATTAATATTTCTTTGTTTTCAACATCTGGTTCTTTGTTTCAAACAATCTCAATGTTTAAT
CTCAACTTCTCCCATTGTTTAGCAGTGAAACGACTTCAATGGAAACCAAATGTTGAGGAA
AATTCAAATCTTGTTTTGGCTTCTTGTAGTTTAGATAATCAAGTTAAAATGTTTGAAGTT
TTATTAGAAAGTTAATTAAACTAAATTGGATGTATAAAAAACTATCTTTGGTGCTGTTTA
GGCTATATGTCATGTTAGTAGTTTTAATTAATGCAATATCACCTGTTTCAATCAATGAGG
TTCCTATGTTTTACAATTGTGTATAACTGTATTTTAACAATGTCACCTTAGATTTTGTCT
AAAATTCAAAAACCGTTATTATTGCCAACGTTTTAATCATATCCCAGTGTCTCATTTCTG
CCCTGCTTTTGAACCTTACAATATAAATGAGGTCCCCAGTTTAAAACCCCCCTAAAATAG
CAAAATAATAACATGTTCCCACTTACGTTTTGCTCCAG
| PANTHER |
Elp2 (IPR037289) - T[1-540] 3.0E-216 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-87] 3.4E-9 - T[97-399] 2.2E-38 - T[400-543] 4.6E-16 |
| SMART |
WD40_repeat (IPR001680) - T[38-78] 2.2E-6 - T[88-127] 260.0 - T[133-173] 0.013 - T[183-221] 11.0 - T[301-345] 0.0018 - T[348-387] 2.9E-6 - T[400-438] 5.2E-5 - T[489-539] 22.0 |
| SUPERFAMILY |
Quinoprotein_ADH-like_supfam (IPR011047) - T[44-243] 5.89E-38 - T[302-443] 5.89E-38 |
| Pfam |
WD40_repeat (IPR001680) - T[44-77] 0.0039 - T[305-331] 0.25 - T[350-382] 0.0016 - T[408-437] 1.9E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[45-78] 10.943 - T[355-382] 9.472 - T[406-439] 11.344 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[45-171] 12.895 - T[308-447] 16.19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ELP2_HUMAN | 44.073 % | 464 | 1.28E-155 |