- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Clone 'cien219172' >
- Transcript 'KH2012:KH.C2.696.v2....' >
- Clone 'CCTU11807' >
- Transcript 'KH2012:KH.C13.170.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.170.v1.A.SL1-1
Possible name(s)
AC011455.3; SARS2
Gene model
Location
KhC13 [1,125,534 / 1,127,790]
Amino acid sequence
Length: 579
>KH.C13.170.v1.A.SL1-1
VKMHNIKSACRLLRIRSCSPCIAHKYIRKSTLIQHHRNVSTAQCGNNTQETTKESKNVPS
QHKVIQFLEEEPEFVRRLNSDFAEPYTDISKLRDFIMNPRGRNYSNSALVEFYEKAKLLK
PAVDVKYMLDNLDKVQENMKMRNCDFDLVKMVVQPYKRMILVQNEVEKYNEMKESVKSQI
ENVHQMNFDGLTLEKQMAKLEQSLQYANNILHILNWVKRQVEAVFLANALMVPNQTHPLA
KDGATEGNVIETVGNKPEFDFPVHDHIFIGEKLKLFRQSRMSDFAGHRNYYLSGDAAELE
QALIQYTLDKLKARNFHFISTPNILKDAMLEGAGVVSNKMEDLLYNIENASADGFCLAGT
SEIGLAAYFSSHAILESQLPIKVCAVSTCYRKETGTRLDPKGLFRVHQFNKVEMFGVTGN
ESGNESEQLQLEFVEIQKELFSDLNLHYNVIDMPANDLGLPAFRKIDIEAWFPGRDRYDE
ISSASNCTDFQSRRLHILYKHDDKYKFAHTVNATACAVPRMIIALLENGQQKDKTIVVPE
CLREYMGGKVILKRDKRRKAMEYIGIKASKKNQRCLADF
Nucleotide sequence
Length: 2,256
>KH2012:KH.C13.170.v1.A.SL1-1
GTAAGTCAAAATGCACAACATTAAAAGTGCATGTAGGTTGTTAAGGATAAGATCGTGTTC
CCCATGTATTGCACACAAGTATATAAGGAAATCAACATTAATACAACACCATAGAAATGT
ATCTACCGCCCAATGTGGCAACAATACACAAGAAACAACAAAAGAAAGTAAAAATGTTCC
TTCACAACATAAAGTGATTCAGTTTTTGGAAGAAGAACCAGAATTTGTGAGAAGGTTGAA
CAGTGACTTTGCTGAACCTTATACGGACATTTCTAAACTCCGGGACTTCATTATGAACCC
AAGAGGGCGAAACTATAGCAACAGTGCGCTTGTGGAGTTCTATGAAAAAGCAAAGCTGTT
AAAACCTGCGGTTGATGTAAAGTATATGCTGGATAACTTGGATAAGGTACAGGAAAATAT
GAAAATGCGGAATTGTGACTTTGATTTGGTGAAAATGGTTGTTCAACCTTATAAAAGAAT
GATTCTTGTGCAAAACGAGGTGGAGAAATACAATGAGATGAAGGAGAGCGTAAAAAGTCA
AATTGAAAATGTTCATCAAATGAATTTTGATGGATTGACCTTGGAAAAACAGATGGCAAA
ATTGGAACAGTCATTACAGTATGCTAACAACATCCTGCATATTTTGAATTGGGTTAAAAG
GCAAGTAGAAGCTGTTTTCTTAGCTAATGCACTTATGGTGCCAAACCAAACACACCCTTT
AGCTAAGGATGGGGCTACAGAAGGCAATGTAATAGAAACTGTTGGAAATAAACCGGAATT
TGATTTTCCAGTTCATGATCATATTTTTATTGGTGAAAAACTTAAATTATTCAGACAAAG
TCGAATGTCTGATTTTGCAGGCCATAGGAACTACTACCTTAGTGGTGATGCAGCAGAGTT
AGAACAAGCACTAATTCAATATACATTGGACAAGCTAAAAGCGAGAAATTTTCATTTTAT
ATCGACGCCAAATATTCTGAAGGATGCAATGTTAGAAGGGGCAGGCGTTGTGTCTAATAA
AATGGAGGATCTGCTGTACAACATTGAAAATGCTTCTGCAGATGGTTTTTGCTTGGCAGG
AACATCAGAGATAGGATTAGCTGCTTATTTTTCAAGCCACGCTATCTTAGAATCGCAGCT
GCCAATTAAAGTATGTGCTGTGAGTACTTGCTACAGGAAAGAAACTGGCACAAGGCTTGA
TCCAAAAGGACTTTTCAGAGTTCACCAATTTAATAAAGTTGAAATGTTTGGAGTGACAGG
AAATGAAAGTGGCAACGAAAGCGAACAACTCCAACTAGAATTTGTCGAGATACAAAAAGA
ACTTTTCAGCGATCTTAATTTACATTATAATGTGATTGACATGCCAGCAAACGACCTGGG
ATTGCCGGCGTTTCGTAAAATCGACATTGAAGCTTGGTTTCCTGGTCGTGACCGCTATGA
TGAGATATCAAGTGCTTCAAACTGCACTGATTTCCAATCCAGGAGACTCCATATATTATA
TAAGCATGACGATAAATATAAATTTGCACATACAGTGAATGCTACCGCATGCGCAGTGCC
CAGAATGATAATTGCGTTACTCGAAAATGGACAACAAAAAGATAAAACTATTGTGGTACC
TGAGTGCTTAAGAGAATATATGGGTGGAAAAGTCATTTTAAAGAGAGATAAAAGGAGAAA
GGCAATGGAGTATATTGGAATTAAAGCTTCGAAAAAGAACCAGCGTTGTTTAGCAGATTT
CTAGTTATATTTTGTTATTTTTTTATTTTATGTTTTATTTTTTTGAAGTGCATTTGCAAA
TGTTTATCATGTTTGTGTCTTGTTTAACTGATTCATGTCTTACTGTAATTAGCATGCTGA
ATTACAGAATGTTACAATGCTTCAAGAAATAAACCTAATTCATATCCTGCAAATGCATAG
GCATTAGGCAGTATGTTATTAAAATAAAATCTGGGGTGACATTGCTAAAGTACAATTACA
TTCATAGTTGTCAAACATAGGGAACCTCATTGATTAATGTGGTGAATGCAATATACTTTG
GCTCTGCTTGTTTGTATAGACACATAACATCAAGGTAAAATCTGGTTTACAATTAAAATT
ACAATGCTAATACATATGATGTCACCGGTGTTTTAAAAGTAGGAATGTTACCTACTTATG
TAACTATGTCATTACGCCTACGCACTGGTGCGTATACAAAGTTATGATTTTGCCACAAAT
ATTCATACTTAACATTTTACTTGCCATATTACCCAG
| PANTHER |
Ser-tRNA-ligase_type_1 (IPR002317) - T[104-560] 9.4E-143 |
| SUPERFAMILY |
tRNA-bd_arm (IPR010978) - T[124-238] 2.04E-5 |
| TIGRFAM |
Ser-tRNA-ligase_type_1 (IPR002317) - T[124-546] 4.2E-98 |
| ProSiteProfiles |
aa-tRNA-synth_II (IPR006195) - T[265-539] 22.374 |
| Pfam |
aa-tRNA-synt_IIb (IPR002314) - T[345-528] 3.2E-25 |
| PRINTS |
Ser-tRNA-ligase_type_1 (IPR002317) - T[404-417] 1.7E-16 - T[447-460] 1.7E-16 - T[464-480] 1.7E-16 - T[482-498] 1.7E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYSM_HUMAN | 39.104 % | 358 | 1.83E-117 |
| SYSC_HUMAN | 38.516 % | 186 | 5.15E-52 |