- Transcript 'KH2012:KH.C14.230.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.230.v1.A.SL2-1
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
KhC14 [26,314 / 41,909]
Amino acid sequence
Length: 690
>KH.C14.230.v1.A.SL2-1
TMFGNKRGGEGDCNKRETRGKREKCSSSKSSNSAASSSSSDSSSDTKNMTRSRRLSDKPA
DSVGDTDINSVFSIGRITRGQMNRLKQISSESLNFELSGSVRLKNSKKSVVAGSSSDQTR
KFVMKRKHELDSEKSPEKKACKSIHGRSIVATRTAILPLASPVPHKAVTRTTSTRRTRLV
SDGSNSDAPPVESNGMITAPTTPTKVNQTPPGNNEWLQRFLQWNARDKIQVLENLIGVCQ
PHEVRHMLEVIEPQFQRDFISLLPKELALYVLSFLQPQDLLIAAQTCKFWRILSEDNLMW
REKCLEEGISEPYMTKIMRNNWKSKRSVGCGSTWKASFLRHARIEANWRSGNTKTPKLLK
GHDDHVITCLQFNGSRIVSGSDDNTLKVWSAISGKCLRTLTGHTGGVWASQMRKNLIISG
STDRTLKIWNADTGLCVHTLYGHTSTVRCLALHDNIVVSGSRDATLRAWNIDTGECTHCL
VGHMAAVRCVCYDGERVVSGAYDYMVKVWDPETEECLHTLQGHTNRVYSLQFDGHYVVSG
SLDTSIKVWEIERGTCLHTLMGHQSLTSGMELRDNILVSGNADSTVKVWDILTGECLKTL
EGSNKHHSAVTCLQFYGKFVITSSDDGTVKLWDVKTGKVVRDLVTLDSRGSGGVVWRIRA
SQTKLVCAVGSRNGTEETKLLVLDFDSEPK
Nucleotide sequence
Length: 2,504
>KH2012:KH.C14.230.v1.A.SL2-1
ACATTAGGGCAAGATATAATTTGTTTTTATTCTTGGAGTAATAACTATAGTAGGTCGTAC
ATTTGATATATTCAGATGTTTGCTGAAGGTTGGTGATCATGTTCATCTGATTTTTTGAAC
AATGTTCGGCAATAAACGTGGAGGTGAAGGTGATTGTAACAAAAGGGAAACTCGGGGGAA
ACGAGAAAAATGTTCGTCCTCCAAAAGTTCCAACTCAGCTGCTTCTTCAAGCTCCTCTGA
TTCAAGTTCTGATACAAAAAACATGACCCGAAGTAGACGACTGTCAGATAAACCTGCAGA
CTCGGTCGGGGACACCGACATCAACTCTGTGTTTTCAATCGGACGTATAACGCGTGGGCA
AATGAATCGCTTGAAACAAATATCTTCAGAGAGTTTAAACTTCGAACTGAGCGGCTCTGT
TCGGTTAAAAAACTCAAAGAAATCTGTTGTTGCTGGAAGTTCTTCAGATCAAACCAGGAA
ATTTGTGATGAAAAGAAAGCATGAACTGGATTCAGAGAAATCACCTGAAAAGAAAGCGTG
CAAGTCAATACATGGCAGAAGTATCGTTGCAACACGAACCGCCATCCTTCCACTTGCGTC
ACCCGTTCCACACAAAGCTGTTACAAGAACAACTTCAACACGGAGAACCAGACTTGTATC
AGATGGGAGTAACAGTGATGCTCCGCCTGTGGAAAGCAATGGGATGATCACAGCACCAAC
CACGCCAACCAAAGTTAACCAAACACCACCTGGTAATAATGAATGGTTGCAAAGGTTCCT
GCAGTGGAATGCCCGCGACAAGATCCAAGTGTTGGAGAATTTGATCGGCGTGTGTCAACC
ACATGAAGTTAGACATATGTTGGAAGTTATTGAACCTCAGTTTCAACGAGATTTTATTTC
ACTTTTACCCAAGGAGCTTGCGCTCTATGTCCTGAGCTTCCTCCAACCACAAGATCTTCT
AATCGCCGCTCAAACTTGTAAATTCTGGAGGATTTTGTCTGAAGATAATTTAATGTGGAG
AGAGAAGTGTTTGGAGGAAGGGATCAGCGAACCTTACATGACGAAGATTATGAGGAATAA
TTGGAAATCCAAACGCAGCGTTGGTTGTGGAAGTACGTGGAAAGCTTCGTTCTTACGCCA
TGCAAGGATTGAAGCGAACTGGAGAAGCGGGAACACTAAAACACCAAAGTTACTAAAGGG
TCACGACGATCACGTGATAACTTGTCTTCAATTTAACGGCTCACGAATCGTGAGTGGATC
TGATGACAATACACTTAAAGTTTGGTCAGCTATTTCTGGAAAGTGCCTTCGAACACTTAC
CGGCCACACAGGGGGGGTGTGGGCTTCACAGATGAGGAAGAATCTCATTATAAGCGGGTC
AACCGATCGAACGTTGAAAATATGGAATGCAGATACTGGTCTTTGTGTCCACACATTATA
TGGTCATACATCAACTGTAAGATGCTTAGCACTTCATGATAATATCGTTGTTAGTGGTTC
ACGTGACGCAACATTGCGTGCTTGGAACATTGACACGGGTGAATGCACGCATTGTCTTGT
GGGTCACATGGCAGCCGTTCGTTGCGTTTGTTACGACGGGGAACGAGTTGTATCGGGGGC
TTACGATTACATGGTGAAAGTCTGGGATCCAGAGACGGAGGAATGTCTGCATACTTTACA
AGGACACACTAATCGTGTCTACTCACTTCAGTTCGACGGCCATTATGTTGTAAGTGGAAG
CCTCGATACTTCTATCAAAGTTTGGGAGATTGAGCGAGGAACTTGTTTACATACGTTGAT
GGGACATCAGTCGTTAACATCAGGGATGGAACTACGGGATAATATATTAGTGTCGGGTAA
CGCTGATTCAACCGTGAAAGTTTGGGATATTTTAACTGGGGAATGCTTGAAGACTTTGGA
AGGTTCAAATAAACATCACAGCGCGGTTACTTGCCTTCAATTCTACGGGAAATTTGTGAT
TACGAGTTCTGATGATGGAACTGTTAAGTTATGGGATGTTAAAACTGGGAAGGTTGTTCG
AGACTTAGTTACGTTAGATTCTCGTGGTTCCGGTGGCGTGGTGTGGCGGATACGAGCGTC
GCAAACTAAACTTGTGTGTGCGGTGGGTAGCAGGAACGGGACTGAAGAAACCAAACTACT
TGTGCTCGATTTTGACTCAGAACCAAAATAACGTTTCAACTTCAAACGTGACGTGTGAAA
ATCATCGCATGTAGAACTCAAGCGTGTTATTTCCATGCTTTAAAACGCGTGTCAATATTA
AGATTTTTTTATTTCTCAATTTTTATACCTCATCACCCATTCTTGCTGATGCGTTTTAAA
AAACGTCTTGAAAACTATTCGTTTTAGCGTCTTGGACGAATGTTCGGTTTATTCCATTTG
TGCTTCCAACTGTACTAGAGTGCATGGTATCATCAGCTTATTCATCGTTGCGATATGGTT
TGTTTACCGTTGGCTTTGTGCAGTAAATGTCAAAAAAATTGCGA
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[243-343] 3.79E-21 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[257-303] 11.697 |
| Pfam |
F-box_dom (IPR001810) - T[261-305] 1.0E-9 |
| SMART |
F-box_dom (IPR001810) - T[263-303] 3.1E-6 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[351-675] 1.92E-94 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[352-690] 6.9E-122 |
| SMART |
WD40_repeat (IPR001680) - T[352-390] 3.7E-5 - T[393-430] 2.7E-7 - T[433-470] 1.1E-7 - T[473-510] 7.8E-6 - T[513-550] 6.9E-9 - T[553-590] 0.0011 - T[593-633] 9.2E-7 - T[636-684] 280.0 |
| Pfam |
WD40_repeat (IPR001680) - T[359-390] 5.2E-6 - T[394-430] 1.3E-5 - T[436-470] 4.3E-4 - T[474-510] 6.2E-5 - T[515-549] 2.6E-7 - T[554-590] 0.019 - T[594-633] 1.6E-7 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[359-642] 64.62 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[373-399] 10.341 - T[400-439] 11.945 - T[440-479] 13.282 - T[480-519] 11.678 - T[520-559] 14.519 - T[560-599] 12.647 - T[603-642] 13.282 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[417-431] . - T[457-471] . - T[537-551] . - T[577-591] . - T[620-634] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[417-431] 1.3E-8 - T[577-591] 1.3E-8 - T[620-634] 1.3E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 74.12 % | 763 | 0 |
| FBW1A_HUMAN | 32.294 % | 234 | 4.43E-68 |
| FBW1B_HUMAN | 31.839 % | 233 | 1.53E-68 |