- Transcript 'KH2012:KH.C14.230.v2...'
Transcript Model
Transcript Id
KH2012:KH.C14.230.v2.A.SL2-1
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
KhC14 [26,314 / 41,909]
Amino acid sequence
Length: 650
>KH.C14.230.v2.A.SL2-1
EAILCMENMTRSRRLSDKPADSVGDTDINSVFSIGRITRGQMNRLKQISSESLNFELSGS
VRLKNSKKSVVAGSSSDQTRKFVMKRKHELDSEKSPEKKACKSIHGRSIVATRTAILPLA
SPVPHKAVTRTTSTRRTRLVSDGSNSDAPPVESNGMITAPTTPTKVNQTPPGNNEWLQRF
LQWNARDKIQVLENLIGVCQPHEVRHMLEVIEPQFQRDFISLLPKELALYVLSFLQPQDL
LIAAQTCKFWRILSEDNLMWREKCLEEGISEPYMTKIMRNNWKSKRSVGCGSTWKASFLR
HARIEANWRSGNTKTPKLLKGHDDHVITCLQFNGSRIVSGSDDNTLKVWSAISGKCLRTL
TGHTGGVWASQMRKNLIISGSTDRTLKIWNADTGLCVHTLYGHTSTVRCLALHDNIVVSG
SRDATLRAWNIDTGECTHCLVGHMAAVRCVCYDGERVVSGAYDYMVKVWDPETEECLHTL
QGHTNRVYSLQFDGHYVVSGSLDTSIKVWEIERGTCLHTLMGHQSLTSGMELRDNILVSG
NADSTVKVWDILTGECLKTLEGSNKHHSAVTCLQFYGKFVITSSDDGTVKLWDVKTGKVV
RDLVTLDSRGSGGVVWRIRASQTKLVCAVGSRNGTEETKLLVLDFDSEPK
Nucleotide sequence
Length: 2,543
>KH2012:KH.C14.230.v2.A.SL2-1
ACATTAGGGCAAGATATAATTTGTTTTTATTCTTGGAGTAATAACTATAGTAGGTCGTAC
ATTTGATATATTCAGATGTTTGCTGAAGGTTGGTGATCATGTTCATCTGATTTTTTGAAC
AATGTTCGGCAATAAACGTGGAGGTGAAGGTGATTGTAACAAAAGGGAAACTCGGGGGAA
ACGAGAAAAATGTTCGTCCTCCAAAAGTTCCAACTCAGCTGCTTCTTCAAGCTCCTCTGA
TTCAAGTTCTGATACAAGTAATATAATATATTACTAAGAGGCTATTCTCTGTATGGAAAA
CATGACCCGAAGTAGACGACTGTCAGATAAACCTGCAGACTCGGTCGGGGACACCGACAT
CAACTCTGTGTTTTCAATCGGACGTATAACGCGTGGGCAAATGAATCGCTTGAAACAAAT
ATCTTCAGAGAGTTTAAACTTCGAACTGAGCGGCTCTGTTCGGTTAAAAAACTCAAAGAA
ATCTGTTGTTGCTGGAAGTTCTTCAGATCAAACCAGGAAATTTGTGATGAAAAGAAAGCA
TGAACTGGATTCAGAGAAATCACCTGAAAAGAAAGCGTGCAAGTCAATACATGGCAGAAG
TATCGTTGCAACACGAACCGCCATCCTTCCACTTGCGTCACCCGTTCCACACAAAGCTGT
TACAAGAACAACTTCAACACGGAGAACCAGACTTGTATCAGATGGGAGTAACAGTGATGC
TCCGCCTGTGGAAAGCAATGGGATGATCACAGCACCAACCACGCCAACCAAAGTTAACCA
AACACCACCTGGTAATAATGAATGGTTGCAAAGGTTCCTGCAGTGGAATGCCCGCGACAA
GATCCAAGTGTTGGAGAATTTGATCGGCGTGTGTCAACCACATGAAGTTAGACATATGTT
GGAAGTTATTGAACCTCAGTTTCAACGAGATTTTATTTCACTTTTACCCAAGGAGCTTGC
GCTCTATGTCCTGAGCTTCCTCCAACCACAAGATCTTCTAATCGCCGCTCAAACTTGTAA
ATTCTGGAGGATTTTGTCTGAAGATAATTTAATGTGGAGAGAGAAGTGTTTGGAGGAAGG
GATCAGCGAACCTTACATGACGAAGATTATGAGGAATAATTGGAAATCCAAACGCAGCGT
TGGTTGTGGAAGTACGTGGAAAGCTTCGTTCTTACGCCATGCAAGGATTGAAGCGAACTG
GAGAAGCGGGAACACTAAAACACCAAAGTTACTAAAGGGTCACGACGATCACGTGATAAC
TTGTCTTCAATTTAACGGCTCACGAATCGTGAGTGGATCTGATGACAATACACTTAAAGT
TTGGTCAGCTATTTCTGGAAAGTGCCTTCGAACACTTACCGGCCACACAGGGGGGGTGTG
GGCTTCACAGATGAGGAAGAATCTCATTATAAGCGGGTCAACCGATCGAACGTTGAAAAT
ATGGAATGCAGATACTGGTCTTTGTGTCCACACATTATATGGTCATACATCAACTGTAAG
ATGCTTAGCACTTCATGATAATATCGTTGTTAGTGGTTCACGTGACGCAACATTGCGTGC
TTGGAACATTGACACGGGTGAATGCACGCATTGTCTTGTGGGTCACATGGCAGCCGTTCG
TTGCGTTTGTTACGACGGGGAACGAGTTGTATCGGGGGCTTACGATTACATGGTGAAAGT
CTGGGATCCAGAGACGGAGGAATGTCTGCATACTTTACAAGGACACACTAATCGTGTCTA
CTCACTTCAGTTCGACGGCCATTATGTTGTAAGTGGAAGCCTCGATACTTCTATCAAAGT
TTGGGAGATTGAGCGAGGAACTTGTTTACATACGTTGATGGGACATCAGTCGTTAACATC
AGGGATGGAACTACGGGATAATATATTAGTGTCGGGTAACGCTGATTCAACCGTGAAAGT
TTGGGATATTTTAACTGGGGAATGCTTGAAGACTTTGGAAGGTTCAAATAAACATCACAG
CGCGGTTACTTGCCTTCAATTCTACGGGAAATTTGTGATTACGAGTTCTGATGATGGAAC
TGTTAAGTTATGGGATGTTAAAACTGGGAAGGTTGTTCGAGACTTAGTTACGTTAGATTC
TCGTGGTTCCGGTGGCGTGGTGTGGCGGATACGAGCGTCGCAAACTAAACTTGTGTGTGC
GGTGGGTAGCAGGAACGGGACTGAAGAAACCAAACTACTTGTGCTCGATTTTGACTCAGA
ACCAAAATAACGTTTCAACTTCAAACGTGACGTGTGAAAATCATCGCATGTAGAACTCAA
GCGTGTTATTTCCATGCTTTAAAACGCGTGTCAATATTAAGATTTTTTTATTTCTCAATT
TTTATACCTCATCACCCATTCTTGCTGATGCGTTTTAAAAAACGTCTTGAAAACTATTCG
TTTTAGCGTCTTGGACGAATGTTCGGTTTATTCCATTTGTGCTTCCAACTGTACTAGAGT
GCATGGTATCATCAGCTTATTCATCGTTGCGATATGGTTTGTTTACCGTTGGCTTTGTGC
AGTAAATGTCAAAAAAATTGCGA
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[203-303] 3.4E-21 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[217-263] 11.697 |
| Pfam |
F-box_dom (IPR001810) - T[221-265] 9.4E-10 |
| SMART |
F-box_dom (IPR001810) - T[223-263] 3.1E-6 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[311-635] 1.65E-94 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[312-650] 5.9E-122 |
| SMART |
WD40_repeat (IPR001680) - T[312-350] 3.7E-5 - T[353-390] 2.7E-7 - T[393-430] 1.1E-7 - T[433-470] 7.8E-6 - T[473-510] 6.9E-9 - T[513-550] 0.0011 - T[553-593] 9.2E-7 - T[596-644] 280.0 |
| Pfam |
WD40_repeat (IPR001680) - T[319-350] 4.9E-6 - T[354-390] 1.2E-5 - T[396-430] 4.0E-4 - T[434-470] 5.8E-5 - T[475-509] 2.4E-7 - T[514-550] 0.018 - T[554-593] 1.5E-7 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[319-602] 64.62 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[333-359] 10.341 - T[360-399] 11.945 - T[400-439] 13.282 - T[440-479] 11.678 - T[480-519] 14.519 - T[520-559] 12.647 - T[563-602] 13.282 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[377-391] . - T[417-431] . - T[497-511] . - T[537-551] . - T[580-594] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[377-391] 1.1E-8 - T[537-551] 1.1E-8 - T[580-594] 1.1E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 73.663 % | 759 | 0 |
| FBW1A_HUMAN | 32.294 % | 234 | 1.85E-68 |
| FBW1B_HUMAN | 31.839 % | 234 | 4.15E-69 |