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  1. Transcript 'KH2012:KH.C14.230.v5...'

Transcript Model

Transcript Id

KH2012:KH.C14.230.v5.A.SL4-1

Possible name(s)

BTRC; FBXW11; FBXW7

Location

KhC14 [40,538 / 41,909]

Sequences

Amino acid sequence

Length: 159

>KH.C14.230.v5.A.SL4-1
FDGHYVVSGSLDTSIKVWEIERGTCLHTLMGHQSLTSGMELRDNILVSGNADSTVKVWDI
LTGECLKTLEGSNKHHSAVTCLQFYGKFVITSSDDGTVKLWDVKTGKVVRDLVTLDSRGS
GGVVWRIRASQTKLVCAVGSRNGTEETKLLVLDFDSEPK

Nucleotide sequence

Length: 793

>KH2012:KH.C14.230.v5.A.SL4-1
TTCGACGGCCATTATGTTGTAAGTGGAAGCCTCGATACTTCTATCAAAGTTTGGGAGATT
GAGCGAGGAACTTGTTTACATACGTTGATGGGACATCAGTCGTTAACATCAGGGATGGAA
CTACGGGATAATATATTAGTGTCGGGTAACGCTGATTCAACCGTGAAAGTTTGGGATATT
TTAACTGGGGAATGCTTGAAGACTTTGGAAGGTTCAAATAAACATCACAGCGCGGTTACT
TGCCTTCAATTCTACGGGAAATTTGTGATTACGAGTTCTGATGATGGAACTGTTAAGTTA
TGGGATGTTAAAACTGGGAAGGTTGTTCGAGACTTAGTTACGTTAGATTCTCGTGGTTCC
GGTGGCGTGGTGTGGCGGATACGAGCGTCGCAAACTAAACTTGTGTGTGCGGTGGGTAGC
AGGAACGGGACTGAAGAAACCAAACTACTTGTGCTCGATTTTGACTCAGAACCAAAATAA
CGTTTCAACTTCAAACGTGACGTGTGAAAATCATCGCATGTAGAACTCAAGCGTGTTATT
TCCATGCTTTAAAACGCGTGTCAATATTAAGATTTTTTTATTTCTCAATTTTTATACCTC
ATCACCCATTCTTGCTGATGCGTTTTAAAAAACGTCTTGAAAACTATTCGTTTTAGCGTC
TTGGACGAATGTTCGGTTTATTCCATTTGTGCTTCCAACTGTACTAGAGTGCATGGTATC
ATCAGCTTATTCATCGTTGCGATATGGTTTGTTTACCGTTGGCTTTGTGCAGTAAATGTC
AAAAAAATTGCGA

InterProScan

ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[1-111] 28.739
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-159] 1.2E-48
ProSiteProfiles
WD40_repeat (IPR001680) - T[1-28] 11.712 - T[29-68] 12.647 - T[72-111] 13.282
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[2-144] 1.69E-34
Pfam
WD40_repeat (IPR001680) - T[2-18] 0.081 - T[23-59] 0.0029 - T[63-102] 1.9E-8
PRINTS
G-protein_beta_WD-40_rep (IPR020472) - T[6-20] 6.5E-10 - T[46-60] 6.5E-10 - T[89-103] 6.5E-10
ProSitePatterns
WD40_repeat_CS (IPR019775) - T[6-20] . - T[46-60] . - T[89-103] .
SMART
WD40_repeat (IPR001680) - T[22-59] 0.0011 - T[62-102] 9.2E-7 - T[105-153] 280.0

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FBXW7_HUMAN 80.503 % 263 5.64E-85
FBW1A_HUMAN 30.588 % 94 4.98E-23
FBW1B_HUMAN 29.825 % 91.3 4.13E-22





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