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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA180YJ04' > 
  2. Clone 'cibd031j08' > 
  3. Clone 'cima825653' > 
  4. Transcript 'KH2012:KH.C14.529.v1...'

Transcript Model

Transcript Id

KH2012:KH.C14.529.v1.A.SL1-1

Possible name(s)

CDC23; GTF3C3; OGT

Gene model

KH2012:KH.C14.529

Location

KhC14 [1,842,171 / 1,857,471]

Sequences

Amino acid sequence

Length: 1,030

>KH.C14.529.v1.A.SL1-1
ESMWGSENSSDAHTVADSEKPSDANSNLSAVSSAFNIPSAQLEQFMAGNVTMETLAACQQ
VPDHETAFQSHPMYETSSFTDVMTGSSSSTPIRPISLASHPQWSTSGVAEISNPFRSPPS
QSNSSLMELQTVTPSRIQHSPTKILSQRKTKPAADMSPSTSHSQSFVLHQDTSALSDIQM
HTYTSPIKNKPEPDSGQRFQIIIGGKRKETVNKDNTRNALTSSVSTFEKITDEAEAMEEG
IDEKDDIDEEDRQNVQDIQRALNIEGDVLTEKRKQGASSRLPRELRGLMGEANLCYARGD
HDDAIKMCMEIIRLVPYAAEPFETLSMIYDERGEPERSLQYSLLAAHLSPRDADQWLHLA
NMCLKQNENTKAINCYTKAFKVRPDDYNIVWENAKLHQKLGLFHKAMALYKIVVGLMPKS
LSVESVSLARDMAKTCHSNNESMLAVDLLEQALEHQASAFKDEDANMLCELLLLLGRYKN
VLEVLCLHSSLILYFSDETALEPKEKIGDRDIISMTLSSDLAIDLQCKVAVAMIRLNKSS
LVEEIASNICSHNPKDIGDLYFDMAEAYSDVGEHEEALKVLNLLVTSPDYSLAAVWLKHA
ECERLCGNLERALKSYKQCVRLAPGHVEAHIKFAESLKLANKFSEANKTLEEADSYEADP
DIRMKLHLTRFQVLKEWGEKSRTNRLSKFSLAADVALLMFANRLGSAFSEGNIAVIKRKN
TLRNSAAGDVRLVKKTSFFWDSDKDSNVFLDGNPSIFTNEQWITLFKETAAILVRCQRYK
DVIRLGDGAQWLASWYDNAETRNLLERVVLSAGMIGGDYANAYNVVRQWLISGHETNHLW
NIFNQITARTGEIRHHRFCLRRLFKVPNHLALTVLNGNNWLASGSYKHALGEYERAHKMD
PENPLYLLLLGVVYFHIASQKYSEHKHSLIVQGIAFLDKYRKLRNVDQESFYNMGRALHQ
IGLESYAVLYYKRALAVPPPTVKQQSALGHQNIVPKFDLTCEIGYNLSLIYRKSGNTDLA
NSTLATYCIV

Nucleotide sequence

Length: 3,666

>KH2012:KH.C14.529.v1.A.SL1-1
TTTTGGCAATGTAGTCTAAGTAAGGTATCATAACTGCCAAAATCGCTGCCTTTTTTAGAT
GAATTAGGAAAGTATGTGGGGTTCTGAAAATAGCAGTGATGCACACACTGTGGCTGATTC
AGAAAAGCCCAGTGATGCCAATTCAAATCTTTCAGCTGTGTCTTCTGCATTTAATATTCC
CTCTGCCCAATTAGAGCAGTTCATGGCAGGAAATGTCACCATGGAAACACTGGCCGCTTG
CCAACAAGTTCCCGACCATGAAACAGCCTTCCAATCACACCCCATGTATGAAACATCAAG
CTTCACTGATGTGATGACGGGCTCCTCTTCTTCAACTCCCATCCGACCGATCTCTCTCGC
CTCCCATCCACAGTGGAGCACATCGGGTGTTGCTGAGATAAGCAATCCGTTCAGGTCTCC
ACCTTCACAGAGCAATTCCAGTTTAATGGAATTACAAACAGTAACCCCATCCAGAATTCA
ACATTCACCAACTAAAATTCTATCGCAAAGAAAAACAAAGCCAGCAGCTGACATGAGCCC
TTCTACCAGTCACAGCCAGTCGTTTGTTTTACATCAGGACACCTCAGCTTTATCAGACAT
ACAAATGCATACGTACACAAGTCCAATAAAAAACAAACCCGAACCTGATTCAGGGCAGAG
ATTTCAAATAATTATTGGAGGAAAACGAAAAGAAACAGTCAATAAAGATAATACACGGAA
TGCTCTCACTTCATCTGTTTCTACCTTTGAGAAAATAACAGATGAAGCTGAAGCTATGGA
AGAAGGTATTGATGAGAAAGATGACATAGATGAGGAAGACAGACAGAATGTACAAGACAT
TCAACGTGCATTAAACATAGAGGGTGACGTTTTAACAGAGAAAAGAAAGCAGGGTGCTTC
AAGTCGTTTGCCCCGTGAGTTGCGAGGTTTGATGGGCGAGGCAAATCTTTGCTACGCACG
TGGCGACCATGATGATGCTATCAAGATGTGTATGGAAATTATCAGGCTCGTCCCATATGC
TGCTGAACCGTTTGAAACTCTATCTATGATTTACGACGAGAGAGGCGAACCTGAACGATC
GCTTCAATACAGTTTATTGGCCGCCCATCTCTCACCCAGGGATGCAGACCAGTGGTTACA
CCTGGCAAATATGTGTTTGAAGCAAAATGAAAACACAAAAGCTATTAACTGTTATACTAA
AGCATTTAAAGTAAGACCTGATGATTACAACATTGTATGGGAAAACGCCAAACTTCACCA
AAAGTTAGGTCTTTTCCACAAAGCAATGGCTTTGTATAAGATTGTGGTCGGCCTCATGCC
CAAGTCCTTATCTGTGGAGTCTGTGTCTCTTGCAAGGGACATGGCAAAAACTTGCCATTC
AAACAATGAAAGCATGCTTGCCGTCGATCTGTTAGAACAAGCACTTGAACATCAGGCTTC
TGCTTTTAAAGATGAGGATGCTAACATGCTGTGTGAACTGCTGCTGTTATTGGGAAGATA
TAAAAATGTCCTTGAGGTCTTATGTCTGCACAGCAGCTTGATTTTGTATTTTTCTGATGA
AACTGCTCTGGAGCCTAAAGAAAAAATAGGTGATCGTGATATTATTAGTATGACCCTATC
TAGTGACCTAGCCATTGATCTTCAATGCAAAGTTGCCGTGGCAATGATACGGTTAAACAA
AAGCTCTTTGGTTGAAGAAATAGCCAGCAATATCTGCAGCCACAACCCCAAAGATATCGG
TGACTTGTACTTTGACATGGCGGAGGCATACTCTGATGTAGGAGAGCATGAAGAGGCTCT
CAAAGTCCTCAATCTTCTCGTAACCTCCCCAGATTACTCTCTCGCTGCTGTATGGCTAAA
ACACGCAGAATGTGAGAGGCTATGCGGCAACCTGGAAAGGGCACTGAAAAGTTATAAGCA
GTGTGTACGGTTAGCCCCTGGTCACGTGGAAGCACATATTAAGTTTGCTGAGTCGTTAAA
ACTCGCCAATAAATTCTCTGAAGCCAATAAGACATTGGAAGAGGCAGACAGCTATGAAGC
GGACCCTGATATCCGGATGAAACTGCATTTAACCAGATTCCAAGTTTTGAAAGAATGGGG
CGAGAAGTCGCGTACAAACAGATTATCTAAGTTTTCGTTGGCTGCGGACGTGGCTCTGCT
GATGTTTGCAAATCGTCTTGGTTCGGCTTTTTCTGAAGGAAATATTGCAGTAATAAAAAG
AAAGAATACATTGCGTAATTCAGCAGCAGGTGATGTGAGACTGGTGAAGAAAACCAGCTT
TTTCTGGGATTCCGACAAAGATTCCAACGTTTTCCTGGATGGCAATCCTTCTATTTTTAC
CAATGAACAGTGGATAACATTATTCAAAGAAACTGCTGCTATTTTGGTTCGATGCCAGAG
ATACAAAGATGTGATTAGACTTGGTGATGGTGCACAGTGGCTTGCGTCTTGGTACGACAA
CGCAGAAACGCGGAATTTGTTGGAACGTGTCGTTTTATCCGCTGGTATGATTGGTGGAGA
TTATGCTAATGCTTATAACGTTGTAAGACAGTGGTTGATCAGTGGACATGAAACAAACCA
TTTATGGAACATATTTAACCAGATAACTGCTCGTACTGGCGAGATTAGACACCACAGGTT
TTGTCTTAGAAGATTATTTAAGGTTCCCAACCATCTTGCTCTAACTGTATTAAACGGTAA
CAATTGGCTTGCATCGGGCAGCTACAAGCATGCACTTGGTGAATACGAAAGAGCTCATAA
AATGGACCCAGAAAATCCTTTATATCTGCTTCTGCTTGGAGTTGTATATTTTCACATCGC
TTCACAAAAGTATTCGGAACATAAACACTCTCTCATTGTACAAGGAATTGCATTTTTAGA
CAAGTATCGCAAGCTACGAAACGTAGACCAGGAATCTTTCTACAACATGGGGCGAGCACT
TCATCAGATAGGTTTGGAAAGTTACGCAGTTCTCTACTACAAACGTGCATTAGCTGTCCC
TCCCCCCACTGTAAAACAACAAAGTGCTCTCGGACACCAAAATATCGTTCCCAAATTTGA
CCTAACTTGCGAGATAGGATACAATCTTTCACTCATATACAGAAAAAGCGGAAACACAGA
TCTAGCAAACAGCACTTTAGCTACCTATTGCATTGTATGAATAAATTTCATTGCGTGTTG
AAATCTTTTCCAGTTTTTATGCTACAATATTTTGTTTTTTTTTCAATCCAAAACTTCTGA
CTGCCTTTCACCTTATCAACATTTGAAGTTGAAAAATCATAATGCCTTACCTAAATTGTT
ATAATCAGTTCAGTTAATGTTAAAACAATGGTGTATAAAATCTGAACGACAACGACAATA
TCTGTGTATTTCTTTTTCATTTTCATTTATATAAAATATGAACCCTTTAAACTTTTAGTA
AGTGTTCAACCAGTTCTTTAAGATGGTAATTCTCCAGTCTGTTTGCTTTTCTTAATTCTC
TTTTCATGTTGTCTTTTTTATTACGTTATATAGTAGGGTGGGGGAAGATGGGACACCTTT
TCATTCTATTTCCACTTTCCATTTAGTTGTGACCAAGAACATTCAAAAAACTATAAAACT
GTATCTTCACGACTTCCATAGACCTTTGTTAATTGTTTAAAACACAATTAAAATATTTGG
ATATTA

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[249-494] 2.5E-24 - T[512-682] 1.4E-14 - T[853-1027] 1.8E-12
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[282-468] 1.04E-24 - T[530-662] 1.04E-24 - T[877-1021] 5.18E-12
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[285-420] 20.646 - T[558-660] 14.515 - T[870-981] 8.991
SMART
TPR_repeat (IPR019734) - T[285-318] 18.0 - T[353-386] 6.9E-5 - T[387-420] 230.0 - T[426-459] 480.0 - T[558-591] 320.0 - T[593-626] 0.45 - T[870-903] 310.0 - T[948-981] 67.0
ProSiteProfiles
TPR_repeat (IPR019734) - T[285-318] 5.192 - T[319-352] 6.402 - T[353-386] 9.883 - T[387-420] 5.31 - T[558-591] 6.254 - T[593-626] 8.231 - T[870-903] 8.319 - T[948-981] 8.349
Pfam
TPR_repeat (IPR019734) - T[356-386] 0.0065 - T[594-625] 0.096

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TF3C3_HUMAN 37.692 % 504 1.21E-163