- Transcript 'KH2012:KH.C14.618.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.618.v1.B.SL2-1
Possible name(s)
SH3RF1; SH3RF2; SH3RF3
Gene model
Location
KhC14 [119,522 / 129,432]
Amino acid sequence
Length: 575
>KH.C14.618.v1.B.SL2-1
LHIYFDLNIMNSEFINDLLECSVCLKPLDQQNKVLPCQHTFCKSCLFSIVRSHKELRCPE
CRVLVKQKVDDLPANILLIRLLDGIKSQESNKPQQPAEKTEFRRHSVEGILTSSIPASGG
AKDGGNGEGGRISTRRNNRHTVHERSGSEPHTTSGLQIPTQSRPHARAIHNYDSQVPSDL
SFKKGDLIMLIKKIDENWTSGECHGKMGVFPTNYVEIIHPLPTERPYCFALYDFESSDAE
KDRDCLTFSKNEKILVIRRVDENWVEGMLRDKIGIFPLSFVKLSEEARKLFEDLHISDPH
PGSKNDGDGKDKGTLGAAARKILSSKPGYKSNKKRHSFPTFQAAKASGEAVPPTTYRHSM
ELGASASIPTSKHGTTSNTNPTVDSDFQNPTNPSQTSRVDNTVRGGGGEINIASSPTSIK
MPMRVSSNVHILQCRTGNGDHGKPTERSPRASIPLPSSGKIVTASYSYHAEKPDELELLK
GESYQITEICNDGWCRGVHIKSGKSGVFPGNYVASNIKSQPTQSTKPDNSTPNNPTMTQD
QQGSSKHPPPRPKVPPIKIPTSNGGSRAESSSSS+
Nucleotide sequence
Length: 1,725
>KH2012:KH.C14.618.v1.B.SL2-1
GCCTACATATATATTTCGACTTAAATATCATGAATTCTGAGTTTATTAATGATTTATTGG
AATGTTCTGTCTGTTTGAAACCGCTGGATCAACAGAATAAGGTCCTCCCATGTCAACATA
CGTTCTGTAAATCTTGTCTTTTTTCCATTGTGCGCTCACACAAGGAGTTGCGTTGTCCTG
AGTGTCGGGTCCTCGTTAAACAAAAAGTTGACGATCTCCCGGCAAACATTCTCCTCATTC
GTTTATTAGACGGAATCAAATCACAAGAATCTAACAAACCACAGCAACCCGCTGAAAAAA
CGGAGTTTCGTCGACATTCGGTTGAAGGTATACTAACCTCCTCCATACCCGCAAGTGGTG
GGGCAAAGGATGGTGGTAATGGGGAGGGGGGGAGGATAAGTACAAGGAGGAACAACAGAC
ATACCGTGCATGAGCGATCTGGTAGTGAACCTCACACTACAAGTGGTTTGCAGATTCCCA
CACAAAGCCGACCTCATGCAAGAGCAATACACAACTATGATTCCCAAGTACCAAGTGATC
TTTCATTTAAGAAAGGTGACCTAATAATGTTGATTAAGAAGATAGATGAAAACTGGACGA
GTGGGGAATGCCATGGGAAGATGGGAGTATTTCCAACTAATTATGTGGAGATAATCCACC
CTTTACCCACCGAGAGACCTTATTGTTTTGCTTTGTATGATTTTGAATCGAGCGATGCAG
AGAAAGATAGAGACTGTCTCACTTTTTCAAAGAACGAAAAGATCCTGGTAATACGAAGAG
TTGATGAGAATTGGGTTGAAGGAATGTTGAGAGATAAGATTGGGATATTTCCTCTATCTT
TTGTTAAGTTAAGTGAGGAAGCTCGTAAGTTGTTCGAAGATCTCCACATCTCGGATCCGC
ATCCTGGGAGCAAGAACGATGGTGATGGTAAAGATAAAGGAACATTGGGAGCAGCAGCAC
GGAAGATCTTAAGTAGCAAACCTGGATATAAAAGTAACAAGAAACGACATTCGTTTCCAA
CATTTCAAGCAGCTAAAGCATCGGGTGAAGCCGTACCTCCCACCACATACAGACATTCCA
TGGAGTTAGGAGCATCAGCAAGTATTCCAACTTCTAAACATGGAACAACATCTAATACAA
ATCCAACAGTGGATTCAGATTTCCAAAATCCAACAAATCCAAGTCAGACTTCCCGTGTTG
ATAATACTGTGAGGGGGGGTGGTGGTGAAATAAACATAGCAAGCTCTCCTACAAGTATAA
AGATGCCGATGAGGGTTTCTTCCAATGTTCATATACTACAGTGTCGTACTGGTAACGGTG
ATCATGGTAAACCAACTGAACGATCGCCACGTGCGTCAATTCCGTTACCAAGCTCTGGGA
AAATAGTGACAGCTTCATACTCGTACCATGCTGAGAAACCCGATGAATTAGAATTATTGA
AGGGTGAAAGTTATCAAATAACTGAGATATGCAACGATGGCTGGTGTAGAGGGGTTCATA
TCAAGAGTGGAAAGTCTGGTGTTTTTCCCGGCAATTATGTGGCAAGCAATATAAAAAGCC
AACCAACCCAATCAACCAAACCTGACAACTCAACACCAAACAACCCAACCATGACACAGG
ATCAACAAGGATCATCCAAACATCCGCCTCCACGACCTAAGGTTCCTCCCATTAAGATCC
CAACATCTAATGGAGGATCAAGAGCAGAGTCATCCTCATCATCAG
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[8-95] 6.0E-17 |
| SMART |
Znf_RING (IPR001841) - T[21-61] 6.4E-6 |
| Pfam |
Znf_C3HC4_RING-type (IPR018957) - T[21-61] 2.4E-9 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[21-62] 12.74 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[37-46] . |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[159-225] 8.53E-21 - T[223-285] 6.69E-16 - T[454-516] 7.35E-17 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[161-220] 15.529 - T[223-286] 12.27 - T[457-518] 14.105 |
| SMART |
SH3_domain (IPR001452) - T[164-219] 3.5E-19 - T[226-285] 3.3E-12 - T[460-517] 2.5E-14 |
| PRINTS |
SH3_domain (IPR001452) - T[164-174] 1.6E-7 - T[178-193] 1.6E-7 - T[206-218] 1.6E-7 |
| Pfam |
SH3_domain (IPR001452) - T[165-217] 3.3E-13 - T[230-277] 1.0E-8 - T[464-514] 1.3E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SH3R3_HUMAN | 38.302 % | 332 | 1.69E-103 |
| SH3R1_HUMAN | 38.577 % | 320 | 3.11E-99 |
| SH3R2_HUMAN | 34.866 % | 260 | 5.96E-78 |