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  1. Transcript 'KH2012:KH.C1.491.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.491.v1.A.nonSL2-1

Possible name(s)

USP11; USP2; USP8

Location

KhC1 [6,017,299 / 6,019,874]

Sequences

Amino acid sequence

Length: 647

>KH.C1.491.v1.A.nonSL2-1
KSKDVDNDAIFSEYEQRIALMVKQKEEKENAIVEIEKKKKVAELQALEKKLKEEAEETEK
RKMEAERQLAMTMRDLSKPKPITNNMEKPLVIEPPNKKDDAPINKDMSPEPIYAEVKKTK
IPKETPGNNKAKQKAPKPERPTAEKPDVSIPSKSVASPVDQSKSTTVSSQHETQVKPKLS
QSAPAISKPVDPIKPTTNQSTTKDVAIKQNKDQEKTVPPKPQEVKPISRKPTLSTGLNPN
SDKGGFALKRSSSSPNINKLVEEESKVVSTSTMPSIPDRERKPSIRPGPSELVTALTHSL
RGVYGGKGRGLCGLRNLGNSCYMNSVLQCMFNMTQLAEYILTDSYTKDLNRANKIGHGGR
VAESFSVLLRAVWSSKYEYIVPSDFKSIIGTINSSFAGYTQEDSQEFLMLLLDGLHEDLN
KAPQSEYKEEPDNDALDDEEAAQMAWKYHKKRNESIIVELLKGQFKATVKCLHCGKASRK
FDPFMYLSLPLPNKSASIYDILKSFQRVEQMTGSDRWHCPNCKTLRDAVRSIEIWKLPPV
LIIHFKRFVHTGRWRDKIHTNISYPMTQLDLTPFISGKQRRPKYNLFAVSHHQGAGLDSG
HYTASCKSVLDNNWYKFDDTEVMRTSAPQGPTASILFYCCYQRHVPN

Nucleotide sequence

Length: 2,575

>KH2012:KH.C1.491.v1.A.nonSL2-1
AAGAGTAAGGATGTAGATAATGATGCCATCTTCAGTGAGTACGAACAGCGAATAGCTCTC
ATGGTGAAGCAAAAAGAAGAAAAGGAAAATGCCATTGTCGAAATAGAAAAGAAGAAAAAG
GTAGCGGAACTCCAGGCTCTTGAAAAGAAACTAAAAGAAGAAGCAGAAGAAACAGAAAAG
AGAAAGATGGAGGCAGAGCGTCAACTTGCTATGACTATGAGAGATCTCAGCAAGCCTAAA
CCAATAACAAATAATATGGAAAAACCTCTTGTTATTGAACCACCAAATAAAAAAGATGAC
GCACCAATCAACAAAGATATGTCACCAGAACCAATTTATGCTGAAGTTAAAAAGACCAAA
ATTCCTAAAGAAACACCTGGAAATAACAAAGCCAAACAAAAAGCTCCAAAACCAGAAAGA
CCAACAGCTGAGAAACCGGATGTTTCAATACCTTCCAAATCAGTAGCCAGCCCAGTGGAT
CAGTCAAAGTCTACAACAGTTTCAAGCCAACATGAAACACAAGTCAAACCCAAGCTAAGT
CAATCTGCGCCTGCCATATCAAAACCTGTAGATCCGATTAAACCAACAACAAATCAATCA
ACTACAAAGGATGTAGCGATAAAACAAAACAAAGATCAGGAAAAAACAGTTCCACCAAAA
CCTCAAGAGGTAAAGCCCATATCTCGAAAGCCAACTTTATCAACTGGGTTGAACCCAAAC
TCTGATAAAGGAGGATTTGCTTTAAAGCGTTCGTCTTCTTCTCCTAACATTAATAAACTG
GTGGAAGAGGAGTCTAAAGTTGTATCTACTTCCACTATGCCAAGTATACCAGACAGGGAA
AGGAAACCAAGCATTAGACCTGGACCCAGTGAACTGGTGACTGCATTAACCCATTCACTT
CGTGGCGTGTATGGTGGTAAAGGAAGGGGTTTGTGTGGGCTTAGAAACCTCGGGAACTCC
TGTTACATGAACTCGGTGCTGCAGTGCATGTTCAATATGACACAGCTTGCTGAATATATT
CTTACCGATAGTTACACAAAAGATCTTAACAGAGCAAACAAGATAGGGCATGGAGGGCGA
GTGGCAGAAAGTTTTTCGGTGCTTTTAAGAGCGGTTTGGAGCTCCAAGTATGAATATATC
GTGCCGTCAGATTTTAAGAGCATAATTGGGACGATAAATTCTAGTTTTGCTGGCTACACC
CAGGAAGATTCGCAGGAGTTTTTGATGCTTCTGTTGGATGGCTTACATGAGGATCTAAAC
AAGGCGCCTCAAAGTGAATATAAAGAGGAGCCAGACAATGATGCTTTGGATGATGAGGAA
GCTGCACAAATGGCTTGGAAATATCACAAGAAGCGAAATGAATCGATTATAGTCGAGTTG
CTGAAGGGTCAGTTTAAAGCCACAGTTAAGTGCCTGCATTGTGGAAAAGCTTCACGTAAG
TTTGATCCTTTCATGTACCTTTCTCTACCACTTCCAAATAAGTCGGCATCAATATACGAC
ATTCTCAAGTCGTTTCAACGAGTGGAACAGATGACTGGAAGTGACCGGTGGCATTGCCCT
AATTGCAAAACACTCAGAGATGCGGTCCGTTCAATTGAAATATGGAAGCTCCCTCCCGTT
CTTATTATTCACTTCAAAAGGTTCGTACACACCGGTCGCTGGAGAGATAAGATACACACC
AACATTTCCTACCCCATGACCCAGCTAGACTTGACTCCTTTCATCAGTGGCAAGCAGAGA
CGACCAAAGTACAATTTATTTGCTGTGTCCCACCATCAAGGTGCTGGTTTGGATAGTGGT
CATTATACAGCTTCATGTAAAAGCGTGCTTGATAATAACTGGTATAAATTTGATGACACA
GAGGTAATGAGAACATCTGCACCTCAAGGACCAACAGCTTCAATTCTATTTTATTGTTGT
TATCAAAGGCATGTCCCCAATTAAACTTATGCAAATGCTGGTGATCATCCAAAAATATTT
GAATTTTGGTAAATTTACACATTTTCAATTTTGGGTGTTGTAATAATGTTAAAACATTAG
GTATTATATTAAAATATATAGTGATCACTGGGCAGCGTAGTTTATTTTCAACCTTTTCAC
TTAACAAAGGCCATGCTTGCTTCTGTTTTATTTATAAACACAATTAACTCATACATTAAA
CATGCTAAGATTGTTAATATATCTGTTGTTTGTGTATATTATGTGTAATATTGTCAATTT
AATTGATTTAAACAGATTTCTTGTTTTTTTTCTGTGTGTTTTATGCACTTAATTGTTTAT
CATTTGATGTTATGTTTTCTTGTTGTTTATTCCACATTCTGTGAATATATATATATTTCG
AAATGTTATCTCTTCTCTACTGTTTGTAAACCTTATTGGCAGCTTTTATTGGCTATTCCA
TTTATTGTAGTACAATAAGTACAACATGTATATTATATGAAAATATGATATTACATATAA
TTCTAACTTTCTAAGGTTATTCAATGTAATAATATCAAATATCTCACACTATGTTAAGCA
TATTTCCGACTTCTATGATTCTTCATTGCTTTATATTTATTTTCTCCGCTTTAAG

InterProScan

Pfam
Peptidase_C19_UCH (IPR001394) - T[312-638] 1.3E-70
ProSiteProfiles
USP_dom (IPR028889) - T[312-641] 54.466
ProSitePatterns
USP_CS (IPR018200) - T[313-328] . - T[584-602] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UBP2_HUMAN 36.212 % 225 2.97E-65
UBP11_HUMAN 48.187 % 205 3.99E-56
UBP8_HUMAN 50.126 % 417 1.09E-132