- Transcript 'KH2012:KH.L9.32.v1.A...' >
- Transcript 'Phmamm.CG.MTP2014.S9...' >
- Transcript 'KH2012:KH.C13.29.v1....' >
- EST 'AV677955' >
- Transcript 'KH2012:KH.C1.491.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.491.v1.A.SL1-1
Possible name(s)
USP11; USP2; USP8
Gene model
Location
KhC1 [6,017,299 / 6,021,237]
Amino acid sequence
Length: 1,101
>KH.C1.491.v1.A.SL1-1
CAIRNFTMAKPKDLYIAKSLKDLNKHTDSKCEKGRSIKIYLNFANKAFAEAEKAFKSRDE
ERAYILYMKYLDMVGIVRKCPEFKKDTQHYSLLLGKMNTITALENAEATSNSLKKRYDAL
AKKAAEAEMKQVEGKIKQNGAVEEFSHPVPDEEKVTETPEKETFGNEVNSAKLYELIYKK
SKDVLILDIRSSEDFQMSHVQHSICANVPKAAIQPGTVVSKIEEGIAPSDMEMWNKRDSV
DLVVLLDWTSSVKRLQDKGDPLRSLKDAIWKWNQDKILQHEPVVLEGGFSDWLEFYPQFT
TNPKAKVPKANVKTLNVNSLLEFSYSDLNTNFVKPKPPPEKKEPEIKAELPTKPIPFTVN
VPNSIPITIAQTNPPKQVSVSNTILKLVTPASEPVETPLPQKKKPQPMFDRSKKPSPAPA
VHPSVPKPESQFKKNGESPKNEMEVVKPSPPSKVKSKDVDNDAIFSEYEQRIALMVKQKE
EKENAIVEIEKKKKVAELQALEKKLKEEAEETEKRKMEAERQLAMTMRDLSKPKPITNNM
EKPLVIEPPNKKDDAPINKDMSPEPIYAEVKKTKIPKETPGNNKAKQKAPKPERPTAEKP
DVSIPSKSVASPVDQSKSTTVSSQHETQVKPKLSQSAPAISKPVDPIKPTTNQSTTKDVA
IKQNKDQEKTVPPKPQEVKPISRKPTLSTGLNPNSDKGGFALKRSSSSPNINKLVEEESK
VVSTSTMPSIPDRERKPSIRPGPSELVTALTHSLRGVYGGKGRGLCGLRNLGNSCYMNSV
LQCMFNMTQLAEYILTDSYTKDLNRANKIGHGGRVAESFSVLLRAVWSSKYEYIVPSDFK
SIIGTINSSFAGYTQEDSQEFLMLLLDGLHEDLNKAPQSEYKEEPDNDALDDEEAAQMAW
KYHKKRNESIIVELLKGQFKATVKCLHCGKASRKFDPFMYLSLPLPNKSASIYDILKSFQ
RVEQMTGSDRWHCPNCKTLRDAVRSIEIWKLPPVLIIHFKRFVHTGRWRDKIHTNISYPM
TQLDLTPFISGKQRRPKYNLFAVSHHQGAGLDSGHYTASCKSVLDNNWYKFDDTEVMRTS
APQGPTASILFYCCYQRHVPN
Nucleotide sequence
Length: 3,938
>KH2012:KH.C1.491.v1.A.SL1-1
ATGTGCTATTAGAAATTTTACCATGGCTAAACCTAAAGATTTGTACATTGCTAAATCTTT
GAAGGATCTTAACAAGCATACTGACAGCAAATGCGAAAAAGGACGTAGCATCAAAATCTA
CTTGAACTTTGCTAACAAGGCATTCGCTGAGGCCGAAAAGGCCTTCAAAAGCCGTGATGA
AGAAAGAGCTTACATCCTGTATATGAAGTACCTGGATATGGTGGGGATAGTCAGGAAATG
CCCCGAGTTTAAAAAAGACACTCAGCATTATTCTCTGTTGCTTGGTAAAATGAATACAAT
CACTGCATTGGAAAATGCAGAGGCAACATCAAACAGTTTAAAGAAAAGATACGATGCTTT
GGCGAAAAAGGCTGCAGAAGCGGAAATGAAGCAAGTGGAAGGTAAAATCAAACAAAATGG
TGCAGTTGAAGAATTTTCCCATCCTGTTCCTGATGAAGAAAAAGTCACAGAAACACCAGA
AAAAGAAACATTTGGAAATGAAGTAAACAGTGCAAAGTTGTATGAATTGATTTACAAAAA
GTCAAAAGATGTTTTAATACTTGACATACGGTCTTCGGAAGATTTTCAAATGTCTCACGT
GCAGCATTCCATCTGCGCTAATGTGCCTAAGGCAGCAATCCAACCTGGAACAGTTGTGTC
CAAAATAGAAGAAGGGATTGCACCAAGTGATATGGAGATGTGGAATAAAAGAGACTCGGT
AGACTTGGTTGTTCTTCTGGATTGGACTTCCTCTGTCAAACGATTACAAGACAAAGGAGA
TCCTCTGAGGAGTTTAAAAGATGCAATCTGGAAGTGGAACCAGGATAAGATCTTGCAGCA
TGAACCTGTTGTACTTGAGGGTGGATTTTCAGATTGGTTGGAATTTTATCCACAATTTAC
CACCAACCCAAAAGCCAAGGTTCCAAAAGCTAATGTGAAGACTCTCAATGTTAACAGTTT
GTTGGAGTTTAGTTATAGCGACCTTAATACCAACTTTGTGAAACCTAAACCACCCCCAGA
GAAGAAAGAGCCCGAGATAAAGGCAGAACTCCCAACCAAACCAATACCATTCACTGTTAA
TGTCCCAAATTCTATTCCCATCACAATAGCTCAAACAAATCCACCAAAGCAAGTTTCAGT
CTCCAACACTATTCTCAAGCTTGTTACTCCTGCATCAGAACCTGTTGAAACTCCTTTACC
GCAGAAGAAGAAACCCCAACCTATGTTTGACAGATCCAAGAAACCCTCACCAGCTCCAGC
AGTACACCCTTCTGTCCCAAAACCAGAGTCACAGTTTAAAAAGAATGGAGAATCACCGAA
AAATGAGATGGAAGTTGTGAAACCATCTCCTCCTTCTAAAGTAAAGAGTAAGGATGTAGA
TAATGATGCCATCTTCAGTGAGTACGAACAGCGAATAGCTCTCATGGTGAAGCAAAAAGA
AGAAAAGGAAAATGCCATTGTCGAAATAGAAAAGAAGAAAAAGGTAGCGGAACTCCAGGC
TCTTGAAAAGAAACTAAAAGAAGAAGCAGAAGAAACAGAAAAGAGAAAGATGGAGGCAGA
GCGTCAACTTGCTATGACTATGAGAGATCTCAGCAAGCCTAAACCAATAACAAATAATAT
GGAAAAACCTCTTGTTATTGAACCACCAAATAAAAAAGATGACGCACCAATCAACAAAGA
TATGTCACCAGAACCAATTTATGCTGAAGTTAAAAAGACCAAAATTCCTAAAGAAACACC
TGGAAATAACAAAGCCAAACAAAAAGCTCCAAAACCAGAAAGACCAACAGCTGAGAAACC
GGATGTTTCAATACCTTCCAAATCAGTAGCCAGCCCAGTGGATCAGTCAAAGTCTACAAC
AGTTTCAAGCCAACATGAAACACAAGTCAAACCCAAGCTAAGTCAATCTGCGCCTGCCAT
ATCAAAACCTGTAGATCCGATTAAACCAACAACAAATCAATCAACTACAAAGGATGTAGC
GATAAAACAAAACAAAGATCAGGAAAAAACAGTTCCACCAAAACCTCAAGAGGTAAAGCC
CATATCTCGAAAGCCAACTTTATCAACTGGGTTGAACCCAAACTCTGATAAAGGAGGATT
TGCTTTAAAGCGTTCGTCTTCTTCTCCTAACATTAATAAACTGGTGGAAGAGGAGTCTAA
AGTTGTATCTACTTCCACTATGCCAAGTATACCAGACAGGGAAAGGAAACCAAGCATTAG
ACCTGGACCCAGTGAACTGGTGACTGCATTAACCCATTCACTTCGTGGCGTGTATGGTGG
TAAAGGAAGGGGTTTGTGTGGGCTTAGAAACCTCGGGAACTCCTGTTACATGAACTCGGT
GCTGCAGTGCATGTTCAATATGACACAGCTTGCTGAATATATTCTTACCGATAGTTACAC
AAAAGATCTTAACAGAGCAAACAAGATAGGGCATGGAGGGCGAGTGGCAGAAAGTTTTTC
GGTGCTTTTAAGAGCGGTTTGGAGCTCCAAGTATGAATATATCGTGCCGTCAGATTTTAA
GAGCATAATTGGGACGATAAATTCTAGTTTTGCTGGCTACACCCAGGAAGATTCGCAGGA
GTTTTTGATGCTTCTGTTGGATGGCTTACATGAGGATCTAAACAAGGCGCCTCAAAGTGA
ATATAAAGAGGAGCCAGACAATGATGCTTTGGATGATGAGGAAGCTGCACAAATGGCTTG
GAAATATCACAAGAAGCGAAATGAATCGATTATAGTCGAGTTGCTGAAGGGTCAGTTTAA
AGCCACAGTTAAGTGCCTGCATTGTGGAAAAGCTTCACGTAAGTTTGATCCTTTCATGTA
CCTTTCTCTACCACTTCCAAATAAGTCGGCATCAATATACGACATTCTCAAGTCGTTTCA
ACGAGTGGAACAGATGACTGGAAGTGACCGGTGGCATTGCCCTAATTGCAAAACACTCAG
AGATGCGGTCCGTTCAATTGAAATATGGAAGCTCCCTCCCGTTCTTATTATTCACTTCAA
AAGGTTCGTACACACCGGTCGCTGGAGAGATAAGATACACACCAACATTTCCTACCCCAT
GACCCAGCTAGACTTGACTCCTTTCATCAGTGGCAAGCAGAGACGACCAAAGTACAATTT
ATTTGCTGTGTCCCACCATCAAGGTGCTGGTTTGGATAGTGGTCATTATACAGCTTCATG
TAAAAGCGTGCTTGATAATAACTGGTATAAATTTGATGACACAGAGGTAATGAGAACATC
TGCACCTCAAGGACCAACAGCTTCAATTCTATTTTATTGTTGTTATCAAAGGCATGTCCC
CAATTAAACTTATGCAAATGCTGGTGATCATCCAAAAATATTTGAATTTTGGTAAATTTA
CACATTTTCAATTTTGGGTGTTGTAATAATGTTAAAACATTAGGTATTATATTAAAATAT
ATAGTGATCACTGGGCAGCGTAGTTTATTTTCAACCTTTTCACTTAACAAAGGCCATGCT
TGCTTCTGTTTTATTTATAAACACAATTAACTCATACATTAAACATGCTAAGATTGTTAA
TATATCTGTTGTTTGTGTATATTATGTGTAATATTGTCAATTTAATTGATTTAAACAGAT
TTCTTGTTTTTTTTCTGTGTGTTTTATGCACTTAATTGTTTATCATTTGATGTTATGTTT
TCTTGTTGTTTATTCCACATTCTGTGAATATATATATATTTCGAAATGTTATCTCTTCTC
TACTGTTTGTAAACCTTATTGGCAGCTTTTATTGGCTATTCCATTTATTGTAGTACAATA
AGTACAACATGTATATTATATGAAAATATGATATTACATATAATTCTAACTTTCTAAGGT
TATTCAATGTAATAATATCAAATATCTCACACTATGTTAAGCATATTTCCGACTTCTATG
ATTCTTCATTGCTTTATATTTATTTTCTCCGCTTTAAG
| Pfam |
USP8_dimer (IPR015063) - T[10-118] 2.0E-23 |
| SUPERFAMILY |
Rhodanese-like_dom_sf (IPR036873) - T[167-307] 6.45E-22 |
| Gene3D |
Rhodanese-like_dom_sf (IPR036873) - T[167-305] 2.1E-34 |
| SMART |
Rhodanese-like_dom (IPR001763) - T[168-298] 6.0E-4 |
| Pfam |
Rhodanese-like_dom (IPR001763) - T[179-293] 3.0E-5 |
| ProSiteProfiles |
Rhodanese-like_dom (IPR001763) - T[180-301] 9.885 |
| ProSiteProfiles |
USP_dom (IPR028889) - T[766-1095] 54.466 |
| Pfam |
Peptidase_C19_UCH (IPR001394) - T[766-1092] 4.1E-70 |
| ProSitePatterns |
USP_CS (IPR018200) - T[767-782] . - T[1038-1056] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBP2_HUMAN | 36.212 % | 224 | 1.02E-62 |
| UBP11_HUMAN | 48.187 % | 206 | 1.84E-54 |
| UBP8_HUMAN | 50.126 % | 419 | 3.19E-128 |