Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.538.v1.R.ND1-1

Possible name(s)

LYPLA1; LYPLA2; LYPLAL1

Gene model

KH2012:KH.C1.538

Location

KhC1 [1,105,071 / 1,110,686]

Sequences

Amino acid sequence

Length: 239

>KH.C1.538.v1.R.ND1-1
ITREAGGLDTKMSVSPQFFLHNSRVPATASVIFLHGLGDTGAGWYHGFDELRKNHVRYIF
PNAPSISVTMNGGFVMPAWYDLKGLGPNTVEDKKGIEASAAKIREIIKTEMDEHNIPSNR
IMLGGFSMGGALALYTALTHPQQLGGVIALSSYLPLHKAFATGEGGISLTAQKCPIFQAH
GTSDPMLPFQFGQMSNMLLQNARKDLNLTTEFKPYQGMGHQSCDEEMDDVKTFIDKCLQ

Nucleotide sequence

Length: 1,291

>KH2012:KH.C1.538.v1.R.ND1-1
TATAACACGCGAAGCTGGGGGCCTGGATACGAAAATGTCGGTTTCACCACAATTCTTTCT
TCATAATTCAAGAGTACCAGCTACTGCCTCAGTTATATTTCTTCATGGACTAGGAGACAC
TGGGGCTGGTTGGTACCATGGGTTTGATGAATTAAGGAAGAATCACGTACGATATATCTT
CCCTAACGCGCCATCGATCTCTGTCACAATGAATGGAGGATTTGTAATGCCAGCATGGTA
TGACCTGAAAGGCTTGGGACCGAATACGGTGGAGGATAAGAAAGGAATTGAAGCATCCGC
TGCTAAAATTCGTGAGATAATCAAGACAGAAATGGATGAACACAACATACCAAGCAATAG
AATTATGTTGGGAGGATTTTCCATGGGTGGGGCCTTAGCATTATACACAGCTTTGACACA
CCCACAGCAACTTGGAGGTGTGATAGCACTCAGCTCATACTTACCACTGCATAAAGCATT
TGCCACTGGTGAAGGGGGAATAAGTCTAACTGCACAGAAGTGCCCAATATTCCAAGCCCA
TGGCACATCAGACCCCATGTTACCATTCCAGTTTGGCCAGATGAGCAACATGCTGTTACA
GAATGCAAGAAAGGATCTCAATCTCACCACTGAGTTTAAACCTTATCAAGGCATGGGACA
CCAGTCATGTGACGAGGAAATGGATGACGTCAAAACCTTTATAGATAAATGTTTGCAATA
GCCAACCACTGTGTAGGACTGGTGGTTTAATGGAGTGATTTTAACCAATATTCAGTTGCA
ATCTGGATCACGTTGTGGCCTTATATGTATTTGACAACTTCGAAAACAGCTTGATCAAAA
CATGCGTGTTTTTTACGTGGCAGGGAATTGATTTTGTTGATAGTAAAATCAAAGCAGTAT
GTATGATATAGAAAGCTTGCGTATCTTTTTTCAAGCAAGTCTGATTTCGTTAACCATATA
TACGAATTTAGCACGCTCACGCGATATTCTGGTAATTGAAAGCCGACATAAACGGACTAC
TGGTTTCAGGCCAGTCGTTTGGTATTCTGTTATATATAATCACCCACAAAGTAAATACTT
GGTAACTGGAAAGCGGGCACGAGATGTATGAACACCCGTGTTATAACGACTGTAATTTTC
CGGCCACGCGGATGAAAGCAAGTTTTTTTTATACATTTATAATTGAGATCCTGCAGCGAT
CCAGGACAAGTTTAACAATAGTAAATTCGTATCGCTGAACAAAAACGTACTTCGATCAAA
TATAGCCTCAGCAGCGTTGCTGTTTACTTCC

InterProScan

Gene3D	AB_hydrolase (IPR029058) - T[7-239] 4.2E-70
Pfam	PLipase/COase/thioEstase (IPR003140) - T[19-237] 1.8E-66
SUPERFAMILY	AB_hydrolase (IPR029058) - T[25-238] 7.02E-50

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LYPL1_HUMAN	32.547 %	107	2.14E-28
LYPA1_HUMAN	50 %	207	1.15E-67
LYPA2_HUMAN	48.815 %	207	1.7E-67