- Transcript 'KH2012:KH.C1.549.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.549.v2.A.nonSL3-1
Possible name(s)
YY1; YY2; ZFP42
Gene model
Location
KhC1 [8,496,089 / 8,500,584]
Amino acid sequence
Length: 355
>KH.C1.549.v2.A.nonSL3-1
KVHFRSRFGEQNAIKINNMDANVLSHHELSVPTELSDNNMEGQSLLPLHQVRQDAGYEDN
LVLQPAEEVVADANLTQNSVLREDEVPIPENTQKSNPGKRKKSKKNRKSDGDKKSKKWEP
KQVQIKTLEGEFSVTMWSSAEDQKRLEGENINDEYAALARLPAVTFEGESSGKNSSQVDS
SNYNYLNSSVDEDLAEPDKIAELASSNFKMKPKRAKGEEAQRTVACPQAGCEKMFRDNAA
MRKHLHTHGPRVHVCAECGKAFVESSKLKRHMLVHTGEKPFQCPFDSCGKRFSLDFNLRT
HMRIHTGDRPYVCPFGSCDKKFAQSTNLKSHILTHAKARKNSSSSSSATSPSHVW
Nucleotide sequence
Length: 1,695
>KH2012:KH.C1.549.v2.A.nonSL3-1
ACTTTTACTGCGAGAACCTGGTTTAAAAGGTGCATTTTCGGTCACGATTCGGGGAGCAAA
ATGCGATAAAGATAAACAATATGGACGCTAATGTTCTGTCTCATCACGAGTTATCGGTAC
CAACTGAGCTAAGTGATAACAATATGGAAGGTCAGAGCCTATTGCCTTTACATCAAGTGA
GGCAGGACGCTGGCTACGAAGATAATTTAGTACTACAGCCTGCAGAAGAAGTAGTAGCAG
ATGCAAATTTAACCCAGAATAGTGTATTACGCGAGGACGAAGTACCTATCCCAGAAAACA
CACAAAAGTCAAATCCTGGAAAACGCAAAAAGTCGAAGAAAAACAGGAAATCGGACGGTG
ATAAAAAGTCAAAAAAATGGGAACCAAAACAAGTTCAAATCAAAACTCTGGAAGGAGAAT
TTTCGGTTACGATGTGGTCGTCCGCAGAAGACCAGAAACGACTTGAAGGGGAAAACATAA
ATGACGAATACGCTGCATTAGCCCGACTACCCGCTGTTACTTTTGAAGGAGAAAGTTCGG
GGAAAAATTCATCTCAAGTTGATTCGAGCAATTATAATTATTTGAACTCCAGTGTTGATG
AAGATTTGGCCGAACCCGATAAAATCGCTGAACTTGCAAGCTCCAACTTTAAAATGAAAC
CAAAACGAGCGAAAGGCGAAGAAGCCCAACGTACCGTTGCGTGCCCTCAGGCCGGATGTG
AGAAGATGTTCCGAGACAACGCAGCTATGAGAAAGCACCTGCACACCCATGGTCCCCGCG
TGCACGTTTGTGCAGAATGTGGCAAAGCATTTGTGGAGAGCTCTAAGCTTAAACGTCACA
TGCTTGTCCATACGGGAGAAAAACCATTTCAGTGTCCATTCGATAGTTGTGGGAAGCGTT
TCTCCCTGGACTTCAACCTGCGTACGCACATGAGGATCCACACCGGTGATCGGCCGTACG
TCTGCCCGTTCGGGAGTTGCGACAAAAAGTTTGCGCAATCTACAAACCTTAAGTCCCACA
TATTAACTCACGCGAAAGCGCGGAAAAACTCGTCTAGTTCATCGTCTGCCACTTCCCCCT
CCCATGTGTGGTAGAGGGGGAATCGTCTGCATTGGACAGTGAATACAGATACACATTGTT
GGCTGTATAAAGGGCAATGGACAGACCTATAGGCGCCTAGCATTGGTATCCAGGGTATAG
GCGTCAGACTATTTAAAATGCACGGGACCATGGGAGTTAGTACACAATCCTATAAATCAA
ATCTAACTTAATGGTTAAAATGTTTATTGATTAATACAGTGCAAAATTATGGGGTTGCCA
TGCCTACCCCGCCACCCCAGGTTTGGTGCCTAAAATGCAGAGCATACATGTCCTGGAATT
AAATTGATGTTAAAAATCTGGGTACATACGAGAACCGGCATACTGCTGATAATGCATCAA
TTAAGGTATAAATATGGGCAAAGGGCATCAAAAATACCCTGTTTTTCCAAAAGATAGGCG
CCTATGGCCCACATAATATTGGTCTGCCTGCAGGGTTGGCAATAATTGGCCTCACAGGAT
CCTTTGTGTTTTATTGCTGTTCTGCATAAATGGGTTACAAAGTGAAATCATAATGCAATA
TTTACAACAAGGGTATATTGGTTGAATTTGGTCCTAACTTGCCCAAAAATAATGTATTAG
ATAATATTCCTACAG
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[223-250] 3.1E-8 - T[261-315] 4.33E-20 - T[305-338] 2.15E-8 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[224-248] 8.538 - T[253-280] 16.664 - T[281-310] 16.061 - T[311-340] 11.822 |
| SMART |
Znf_C2H2_type (IPR013087) - T[224-248] 0.012 - T[253-275] 0.0048 - T[281-305] 8.4E-4 - T[311-335] 0.0013 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[255-275] . - T[283-305] . - T[313-335] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TYY1_HUMAN | 64.348 % | 300 | 9.45E-100 |
| TYY2_HUMAN | 58.547 % | 270 | 1.61E-88 |
| ZFP42_HUMAN | 63.087 % | 208 | 5.04E-65 |