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TRANSCRIPT CARD

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  1. Molecular Tool 'NVPBHG712' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'KH2012:KH.C1.73.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C1.73.v1.A.SL1-1

Possible name(s)

MAP4; MAPT

Gene model

KH2012:KH.C1.73

Location

KhC1 [9,579,508 / 9,588,990]

Sequences

Amino acid sequence

Length: 491

>KH.C1.73.v1.A.SL1-1
ATKQGCNIQVTTTTNETRKKAKDPKVQGKSPTRKPIKKTEIKFTGAERTKSTPTTIRTVT
SPTRQPPIRKPLSATPVGRPKRIDPSRTLTPTTIRVTPSSTPTRRPLGTNKITDEKQKTP
TPTRGRPSSEGRIKSATSTPRRERPPSVGSTGSGRMTTRNIQSKVGSLNNITHTPGGGKV
KIESKKTSYNNVSSKCGSRANLNHTPGGGKVKIEHRKVNVSNVTSKCGSFNNITHTPGGG
KVKIESKKLDFGKVSSKCGSKDNIHHTPSGGKVKVEHHKLNFAHVQSKCGSKDNLTHTPG
GGKVKIEAKKMDLSHVQSKCGSTDNIKHEPQGGKVKIFKQRKLNFSNVHSRISSLSNMSH
SPGGGKVKIFSKKLDVAQVSSKVGSKDNLKHTPGGGNVKIRSKNLDLSNVGSKCGSLDNA
KHKPGGGNVQIFDEKLDFKETAKPKVPFSENANHTPGGGNIEILNEPLKFRDKASSRTDS
GVNMSATSSES

Nucleotide sequence

Length: 2,363

>KH2012:KH.C1.73.v1.A.SL1-1
GAGCCACCAAGCAAGGTTGTAACATCCAAGTGACAACGACAACTAACGAAACGCGTAAAA
AAGCGAAGGATCCGAAAGTACAAGGGAAATCCCCCACACGAAAACCAATAAAGAAAACTG
AAATCAAGTTCACTGGAGCGGAACGAACAAAATCAACCCCAACAACAATACGAACTGTGA
CATCACCCACTCGTCAACCCCCGATAAGAAAACCACTCTCTGCTACCCCCGTTGGTCGAC
CCAAGCGTATTGACCCTTCGCGAACTTTGACCCCCACCACCATCCGTGTGACCCCTTCGT
CGACCCCTACACGTCGACCACTTGGGACGAATAAAATTACAGACGAAAAACAGAAAACCC
CCACACCTACAAGGGGACGACCAAGTTCTGAAGGAAGAATTAAATCGGCAACTTCTACTC
CAAGAAGAGAAAGACCTCCAAGTGTTGGGTCAACTGGTAGCGGAAGAATGACGACACGGA
ACATTCAAAGTAAAGTTGGTTCATTGAACAATATCACACACACCCCTGGTGGGGGGAAGG
TTAAAATAGAGAGCAAGAAAACAAGTTACAACAACGTGTCTTCGAAATGTGGTTCGCGAG
CAAACTTAAACCACACCCCTGGAGGTGGCAAGGTTAAAATTGAACATAGGAAAGTGAATG
TGTCGAATGTAACTTCTAAATGTGGATCGTTCAATAACATTACACACACACCTGGAGGGG
GAAAGGTTAAAATTGAAAGCAAGAAACTTGACTTTGGTAAAGTGTCGTCCAAATGTGGAT
CCAAGGATAATATTCATCATACACCGAGTGGAGGGAAGGTAAAAGTGGAACATCATAAAT
TAAACTTTGCGCACGTTCAATCTAAATGTGGATCCAAGGATAATCTTACTCACACCCCCG
GTGGTGGAAAGGTTAAAATTGAAGCGAAGAAAATGGATTTAAGTCACGTTCAGTCCAAAT
GTGGGTCAACCGACAATATTAAGCATGAACCACAAGGAGGAAAGGTTAAAATTTTCAAAC
AGCGAAAGTTAAATTTTTCCAACGTCCATTCTCGGATAAGTAGTTTGTCAAACATGAGCC
ACAGCCCTGGTGGGGGGAAGGTTAAAATATTCTCTAAGAAGCTCGACGTGGCACAAGTGT
CATCCAAGGTTGGAAGTAAGGACAACCTCAAGCACACCCCCGGTGGTGGGAATGTAAAGA
TTAGAAGCAAGAATCTTGACCTAAGTAATGTTGGGTCTAAATGTGGATCTTTGGATAATG
CAAAACATAAACCAGGTGGTGGCAATGTTCAAATATTTGATGAAAAACTTGACTTTAAAG
AAACAGCCAAACCAAAGGTTCCTTTCTCGGAGAATGCAAACCACACACCAGGTGGAGGAA
ACATAGAAATTTTAAACGAACCGCTTAAATTTCGTGACAAAGCTTCGTCAAGAACTGACA
GTGGAGTTAACATGTCAGCTACATCATCTGAATCCTGACTTGAATGCAAGACAACTCTAT
GATGCAACAATCGCACTTTGGTGACGTAACAATGAACTCTGTTGATCCACAATACTACGT
AGCAACGTCAATGTTGTAAATATGTTTTTTACTTTCCTAGATATTTGTATTTTACCAGCC
AACATGGTATGTAGCGTTTTATATTTTTAAGCACATATCTTACCATTTATTTTACCAAAA
AAATCAAAATCAAATGTACAGGGTATTGGTACACAACTTTTGTGGTGCGTTAGTAACAGT
ACAATATTTTAACTGTATACATGATTAGATTTCGACTGCTTTTTAATGTACAACCAAATT
CTACCACTTTTCGGTAATTTAGCAATTTTCTTACGTAACTTAACATACAACAATGTTAAA
TCAAAACCTAAGAAAATGAATTGAGTATTGCAACCTACTTTAGTATTCAAATCAAATAAA
ATTCTAAACAAATATAAATCTAAAATTTGAAGAACAATATTTTTTGTCTAACTTGAACCT
ACAGTAGTCAAAAATTCTGTAAATAGTTTTAAAACCAATCAACTTTGTACATATGTAATG
GACACTACCGTTCAGGTACTTTTATTTTACCTGTGGCTGCTTTTATTTTAACAACTGTTT
TATAACAGCTGTAAAGAATTTCATTTTTGGGTCCTTGTTTTTTACCTTTATTGTCAAAAA
TGTTTTTCTAAAGAGTTAAAGTTACTTTGTCCCAAATATCAACATGTTTTGCACCAATGT
TTGAGATTAGTATAGCTGCTTATGATGTCATAATGTCCAGTCTTCCTGAACAATGTAACA
TAGCAGCAGGTTTGGGTGTTAATTTGCGAATATAAACTGCTCATTTTTACTGACAATAAA
CTGTGAATGTATTCGTGTAAAAA

InterProScan

ProSiteProfiles
MAP_tubulin-bd_rpt (IPR001084) - T[149-179] 10.213 - T[180-210] 10.198 - T[211-241] 10.758 - T[242-272] 11.499 - T[273-303] 11.242 - T[304-334] 12.724 - T[336-366] 9.593 - T[367-397] 12.029 - T[398-428] 12.286 - T[429-460] 9.926
Pfam
MAP_tubulin-bd_rpt (IPR001084) - T[160-179] 7.9E-9 - T[180-210] 1.4E-12 - T[211-241] 1.7E-14 - T[242-272] 3.5E-15 - T[273-303] 1.4E-15 - T[304-334] 4.9E-16 - T[336-366] 3.4E-10 - T[367-397] 8.8E-15 - T[398-428] 3.5E-15 - T[429-460] 1.3E-8
ProSitePatterns
MAP_tubulin-bd_rpt (IPR001084) - T[166-178] . - T[290-302] . - T[384-396] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MAP4_HUMAN 43.103 % 157 3.17E-41
TAU_HUMAN 53.191 % 152 9.85E-40
MTAP2_HUMAN 49.167 % 121 5.73E-29