Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cibd004c06' > 
  2. Transcript 'Moocul.CG.ELv1_2.S43...' > 
  3. Transcript 'Cisavi.CG.ENS81.R3.1...' > 
  4. Transcript 'Cisavi.CG.ENS81.R3.1...' > 
  5. Transcript 'KH2012:KH.C1.73.v2.A...'

Transcript Model

Transcript Id

KH2012:KH.C1.73.v2.A.SL3-1

Possible name(s)

MAP4; MAPT

Gene model

KH2012:KH.C1.73

Location

KhC1 [9,579,508 / 9,589,052]

Sequences

Amino acid sequence

Length: 511

>KH.C1.73.v2.A.SL3-1
YYLVFCVVYFQCLIFLCYVKGATKQGCNIQVTTTTNETRKKAKDPKVQGKSPTRKPIKKT
EIKFTGAERTKSTPTTIRTVTSPTRQPPIRKPLSATPVGRPKRIDPSRTLTPTTIRVTPS
STPTRRPLGTNKITDEKQKTPTPTRGRPSSEGRIKSATSTPRRERPPSVGSTGSGRMTTR
NIQSKVGSLNNITHTPGGGKVKIESKKTSYNNVSSKCGSRANLNHTPGGGKVKIEHRKVN
VSNVTSKCGSFNNITHTPGGGKVKIESKKLDFGKVSSKCGSKDNIHHTPSGGKVKVEHHK
LNFAHVQSKCGSKDNLTHTPGGGKVKIEAKKMDLSHVQSKCGSTDNIKHEPQGGKVKIFS
KKLDVAQVSSKVGSKDNLKHTPGGGNTKIIHEKVDVSDVQPKVGSREFIDHQPLGGDVKI
RSKNLDLSNVGSKCGSLDNAKHKPGGGNVQIFDEKLDFKETAKPKVPFSENANHTPGGGN
IEILNEPLKFRDKASSRTDSGVNMSATSSES

Nucleotide sequence

Length: 2,422

>KH2012:KH.C1.73.v2.A.SL3-1
ATACTACCTGGTGTTCTGTGTCGTATATTTTCAATGTTTAATATTTCTATGTTACGTTAA
AGGAGCCACCAAGCAAGGTTGTAACATCCAAGTGACAACGACAACTAACGAAACGCGTAA
AAAAGCGAAGGATCCGAAAGTACAAGGGAAATCCCCCACACGAAAACCAATAAAGAAAAC
TGAAATCAAGTTCACTGGAGCGGAACGAACAAAATCAACCCCAACAACAATACGAACTGT
GACATCACCCACTCGTCAACCCCCGATAAGAAAACCACTCTCTGCTACCCCCGTTGGTCG
ACCCAAGCGTATTGACCCTTCGCGAACTTTGACCCCCACCACCATCCGTGTGACCCCTTC
GTCGACCCCTACACGTCGACCACTTGGGACGAATAAAATTACAGACGAAAAACAGAAAAC
CCCCACACCTACAAGGGGACGACCAAGTTCTGAAGGAAGAATTAAATCGGCAACTTCTAC
TCCAAGAAGAGAAAGACCTCCAAGTGTTGGGTCAACTGGTAGCGGAAGAATGACGACACG
GAACATTCAAAGTAAAGTTGGTTCATTGAACAATATCACACACACCCCTGGTGGGGGGAA
GGTTAAAATAGAGAGCAAGAAAACAAGTTACAACAACGTGTCTTCGAAATGTGGTTCGCG
AGCAAACTTAAACCACACCCCTGGAGGTGGCAAGGTTAAAATTGAACATAGGAAAGTGAA
TGTGTCGAATGTAACTTCTAAATGTGGATCGTTCAATAACATTACACACACACCTGGAGG
GGGAAAGGTTAAAATTGAAAGCAAGAAACTTGACTTTGGTAAAGTGTCGTCCAAATGTGG
ATCCAAGGATAATATTCATCATACACCGAGTGGAGGGAAGGTAAAAGTGGAACATCATAA
ATTAAACTTTGCGCACGTTCAATCTAAATGTGGATCCAAGGATAATCTTACTCACACCCC
CGGTGGTGGAAAGGTTAAAATTGAAGCGAAGAAAATGGATTTAAGTCACGTTCAGTCCAA
ATGTGGGTCAACCGACAATATTAAGCATGAACCACAAGGAGGAAAGGTTAAAATATTCTC
TAAGAAGCTCGACGTGGCACAAGTGTCATCCAAGGTTGGAAGTAAGGACAACCTCAAGCA
CACCCCCGGTGGTGGGAATACAAAGATAATTCATGAAAAGGTTGACGTCTCGGATGTTCA
ACCAAAAGTTGGCAGTAGAGAGTTCATTGACCACCAGCCATTAGGAGGCGATGTAAAGAT
TAGAAGCAAGAATCTTGACCTAAGTAATGTTGGGTCTAAATGTGGATCTTTGGATAATGC
AAAACATAAACCAGGTGGTGGCAATGTTCAAATATTTGATGAAAAACTTGACTTTAAAGA
AACAGCCAAACCAAAGGTTCCTTTCTCGGAGAATGCAAACCACACACCAGGTGGAGGAAA
CATAGAAATTTTAAACGAACCGCTTAAATTTCGTGACAAAGCTTCGTCAAGAACTGACAG
TGGAGTTAACATGTCAGCTACATCATCTGAATCCTGACTTGAATGCAAGACAACTCTATG
ATGCAACAATCGCACTTTGGTGACGTAACAATGAACTCTGTTGATCCACAATACTACGTA
GCAACGTCAATGTTGTAAATATGTTTTTTACTTTCCTAGATATTTGTATTTTACCAGCCA
ACATGGTATGTAGCGTTTTATATTTTTAAGCACATATCTTACCATTTATTTTACCAAAAA
AATCAAAATCAAATGTACAGGGTATTGGTACACAACTTTTGTGGTGCGTTAGTAACAGTA
CAATATTTTAACTGTATACATGATTAGATTTCGACTGCTTTTTAATGTACAACCAAATTC
TACCACTTTTCGGTAATTTAGCAATTTTCTTACGTAACTTAACATACAACAATGTTAAAT
CAAAACCTAAGAAAATGAATTGAGTATTGCAACCTACTTTAGTATTCAAATCAAATAAAA
TTCTAAACAAATATAAATCTAAAATTTGAAGAACAATATTTTTTGTCTAACTTGAACCTA
CAGTAGTCAAAAATTCTGTAAATAGTTTTAAAACCAATCAACTTTGTACATATGTAATGG
ACACTACCGTTCAGGTACTTTTATTTTACCTGTGGCTGCTTTTATTTTAACAACTGTTTT
ATAACAGCTGTAAAGAATTTCATTTTTGGGTCCTTGTTTTTTACCTTTATTGTCAAAAAT
GTTTTTCTAAAGAGTTAAAGTTACTTTGTCCCAAATATCAACATGTTTTGCACCAATGTT
TGAGATTAGTATAGCTGCTTATGATGTCATAATGTCCAGTCTTCCTGAACAATGTAACAT
AGCAGCAGGTTTGGGTGTTAATTTGCGAATATAAACTGCTCATTTTTACTGACAATAAAC
TGTGAATGTATTCGTGTAAAAA

InterProScan

ProSiteProfiles
MAP_tubulin-bd_rpt (IPR001084) - T[170-200] 10.213 - T[201-231] 10.198 - T[232-262] 10.758 - T[263-293] 11.499 - T[294-324] 11.242 - T[325-355] 12.724 - T[356-386] 12.029 - T[387-417] 9.155 - T[418-448] 12.286 - T[449-480] 9.926
Pfam
MAP_tubulin-bd_rpt (IPR001084) - T[181-200] 8.3E-9 - T[201-231] 1.5E-12 - T[232-262] 1.8E-14 - T[263-293] 3.7E-15 - T[294-324] 1.5E-15 - T[325-355] 5.1E-16 - T[356-386] 9.3E-15 - T[388-417] 8.1E-9 - T[418-448] 3.6E-15 - T[449-480] 1.4E-8
ProSitePatterns
MAP_tubulin-bd_rpt (IPR001084) - T[187-199] . - T[311-323] . - T[373-385] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MAP4_HUMAN 43.103 % 158 3.53E-41
TAU_HUMAN 48 % 153 6.84E-40
MTAP2_HUMAN 47.917 % 115 4.11E-27