- Transcript 'KH2012:KH.C8.418.v1....' >
- Transcript 'KH2012:KH.C1.73.v6.R...'
Transcript Model
Transcript Id
KH2012:KH.C1.73.v6.R.ND4-1
Possible name(s)
MAP4; MAPT
Gene model
Location
KhC1 [9,579,508 / 9,588,691]
Amino acid sequence
Length: 475
>KH.C1.73.v6.R.ND4-1
ETRKKAKDPKVQGKSPTRKPIKKTEIKFTGAERTKSTPTTIRTVTSPTRQPPIRKPLSAT
PVGRPKRIDPSRTLTPTTIRVTPSSTPTRRPLGTNKITDEKQKTPTPTRGRPSSEGRIKS
ATSTPRRERPPSVGSTGSGRMTTRNIQSKVGSLNNITHTPGGGKVKIESKKTSYNNVSSK
CGSRANLNHTPGGGKVKIEHRKVNVSNVTSKCGSFNNITHTPGGGKVKIESKKLDFGKVS
SKCGSKDNIHHTPSGGKVKVEHHKLNFAHVQSKCGSKDNLTHTPGGGKVKIEAKKMDLSH
VQSKCGSTDNIKHEPQGGKVKIFSKKLDVAQVSSKVGSKDNLKHTPGGGNTKIIHEKVDV
SDVQPKVGSREFIDHQPLGGDVKIRSKNLDLSNVGSKCGSLDNAKHKPGGGNVQIFDEKL
DFKETAKPKVPFSENANHTPGGGNIEILNEPLKFRDKASSRTDSGVNMSATSSES
Nucleotide sequence
Length: 2,313
>KH2012:KH.C1.73.v6.R.ND4-1
GAAACGCGTAAAAAAGCGAAGGATCCGAAAGTACAAGGGAAATCCCCCACACGAAAACCA
ATAAAGAAAACTGAAATCAAGTTCACTGGAGCGGAACGAACAAAATCAACCCCAACAACA
ATACGAACTGTGACATCACCCACTCGTCAACCCCCGATAAGAAAACCACTCTCTGCTACC
CCCGTTGGTCGACCCAAGCGTATTGACCCTTCGCGAACTTTGACCCCCACCACCATCCGT
GTGACCCCTTCGTCGACCCCTACACGTCGACCACTTGGGACGAATAAAATTACAGACGAA
AAACAGAAAACCCCCACACCTACAAGGGGACGACCAAGTTCTGAAGGAAGAATTAAATCG
GCAACTTCTACTCCAAGAAGAGAAAGACCTCCAAGTGTTGGGTCAACTGGTAGCGGAAGA
ATGACGACACGGAACATTCAAAGTAAAGTTGGTTCATTGAACAATATCACACACACCCCT
GGTGGGGGGAAGGTTAAAATAGAGAGCAAGAAAACAAGTTACAACAACGTGTCTTCGAAA
TGTGGTTCGCGAGCAAACTTAAACCACACCCCTGGAGGTGGCAAGGTTAAAATTGAACAT
AGGAAAGTGAATGTGTCGAATGTAACTTCTAAATGTGGATCGTTCAATAACATTACACAC
ACACCTGGAGGGGGAAAGGTTAAAATTGAAAGCAAGAAACTTGACTTTGGTAAAGTGTCG
TCCAAATGTGGATCCAAGGATAATATTCATCATACACCGAGTGGAGGGAAGGTAAAAGTG
GAACATCATAAATTAAACTTTGCGCACGTTCAATCTAAATGTGGATCCAAGGATAATCTT
ACTCACACCCCCGGTGGTGGAAAGGTTAAAATTGAAGCGAAGAAAATGGATTTAAGTCAC
GTTCAGTCCAAATGTGGGTCAACCGACAATATTAAGCATGAACCACAAGGAGGAAAGGTT
AAAATATTCTCTAAGAAGCTCGACGTGGCACAAGTGTCATCCAAGGTTGGAAGTAAGGAC
AACCTCAAGCACACCCCCGGTGGTGGGAATACAAAGATAATTCATGAAAAGGTTGACGTC
TCGGATGTTCAACCAAAAGTTGGCAGTAGAGAGTTCATTGACCACCAGCCATTAGGAGGC
GATGTAAAGATTAGAAGCAAGAATCTTGACCTAAGTAATGTTGGGTCTAAATGTGGATCT
TTGGATAATGCAAAACATAAACCAGGTGGTGGCAATGTTCAAATATTTGATGAAAAACTT
GACTTTAAAGAAACAGCCAAACCAAAGGTTCCTTTCTCGGAGAATGCAAACCACACACCA
GGTGGAGGAAACATAGAAATTTTAAACGAACCGCTTAAATTTCGTGACAAAGCTTCGTCA
AGAACTGACAGTGGAGTTAACATGTCAGCTACATCATCTGAATCCTGACTTGAATGCAAG
ACAACTCTATGATGCAACAATCGCACTTTGGTGACGTAACAATGAACTCTGTTGATCCAC
AATACTACGTAGCAACGTCAATGTTGTAAATATGTTTTTTACTTTCCTAGATATTTGTAT
TTTACCAGCCAACATGGTATGTAGCGTTTTATATTTTTAAGCACATATCTTACCATTTAT
TTTACCAAAAAAATCAAAATCAAATGTACAGGGTATTGGTACACAACTTTTGTGGTGCGT
TAGTAACAGTACAATATTTTAACTGTATACATGATTAGATTTCGACTGCTTTTTAATGTA
CAACCAAATTCTACCACTTTTCGGTAATTTAGCAATTTTCTTACGTAACTTAACATACAA
CAATGTTAAATCAAAACCTAAGAAAATGAATTGAGTATTGCAACCTACTTTAGTATTCAA
ATCAAATAAAATTCTAAACAAATATAAATCTAAAATTTGAAGAACAATATTTTTTGTCTA
ACTTGAACCTACAGTAGTCAAAAATTCTGTAAATAGTTTTAAAACCAATCAACTTTGTAC
ATATGTAATGGACACTACCGTTCAGGTACTTTTATTTTACCTGTGGCTGCTTTTATTTTA
ACAACTGTTTTATAACAGCTGTAAAGAATTTCATTTTTGGGTCCTTGTTTTTTACCTTTA
TTGTCAAAAATGTTTTTCTAAAGAGTTAAAGTTACTTTGTCCCAAATATCAACATGTTTT
GCACCAATGTTTGAGATTAGTATAGCTGCTTATGATGTCATAATGTCCAGTCTTCCTGAA
CAATGTAACATAGCAGCAGGTTTGGGTGTTAATTTGCGAATATAAACTGCTCATTTTTAC
TGACAATAAACTGTGAATGTATTCGTGTAAAAA
| ProSiteProfiles |
MAP_tubulin-bd_rpt (IPR001084) - T[134-164] 10.213 - T[165-195] 10.198 - T[196-226] 10.758 - T[227-257] 11.499 - T[258-288] 11.242 - T[289-319] 12.724 - T[320-350] 12.029 - T[351-381] 9.155 - T[382-412] 12.286 - T[413-444] 9.926 |
| Pfam |
MAP_tubulin-bd_rpt (IPR001084) - T[145-164] 7.6E-9 - T[165-195] 1.4E-12 - T[196-226] 1.6E-14 - T[227-257] 3.3E-15 - T[258-288] 1.4E-15 - T[289-319] 4.7E-16 - T[320-350] 8.5E-15 - T[352-381] 7.4E-9 - T[382-412] 3.3E-15 - T[413-444] 1.3E-8 |
| ProSitePatterns |
MAP_tubulin-bd_rpt (IPR001084) - T[151-163] . - T[275-287] . - T[337-349] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MAP4_HUMAN | 43.103 % | 157 | 2.59E-41 |
| TAU_HUMAN | 48 % | 154 | 2.11E-40 |
| MTAP2_HUMAN | 47.917 % | 115 | 2.76E-27 |