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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.920.v2....'
  2. Transcript 'Boleac.CG.SB_v3.S284...'
  3. Molecular Tool 'Cirobu.Bra>MRFa (Izzi 2013)'
  4. Molecular Tool 'Ci-MRF-MO4468 (Meedel 2007)'
  5. Transcript 'KH2012:KH.C1.920.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.920.v1.A.nonSL3-1

Possible name(s)

ATP6V1D

Location

KhC1 [7,239,014 / 7,240,118]

Sequences

Amino acid sequence

Length: 165

>KH.C1.920.v1.A.nonSL3-1
QMKVRSKTDNVAGVKLPVFEHYEDGSDSYELTGLSRGGEQLSRLKKNYSKAVKLLVELAS
LQTSFVTLDESIKITNRRVNAIEHVIIPKIERTISYIITELDEGEREEFFRLKKIQQKKE
VIREAQEKVRKDWEKEKEAREVFSSIPSNHVPSMLDDKEDEDLLF

Nucleotide sequence

Length: 1,104

>KH2012:KH.C1.920.v1.A.nonSL3-1
ACAAATGAAAGTAAGGAGTAAAACGGATAATGTGGCGGGGGTAAAATTACCGGTGTTTGA
GCATTATGAGGATGGTTCTGACAGCTATGAGCTAACAGGACTCTCTAGGGGAGGGGAGCA
ACTTTCAAGGCTAAAGAAGAATTATTCTAAGGCTGTGAAGCTTCTTGTTGAGCTTGCATC
ACTGCAGACATCATTCGTGACACTGGATGAGTCAATCAAAATCACCAATCGCAGAGTAAA
TGCAATTGAGCACGTTATTATTCCAAAGATTGAGAGAACAATCTCCTACATCATCACAGA
GCTGGATGAGGGCGAGAGGGAGGAGTTCTTCCGGTTGAAAAAGATTCAGCAGAAGAAGGA
AGTGATCCGCGAAGCTCAGGAAAAAGTGAGGAAGGATTGGGAGAAAGAAAAGGAGGCTAG
AGAAGTTTTCTCTTCTATTCCGTCCAACCATGTTCCGAGCATGCTGGATGATAAAGAAGA
CGAAGATTTGTTGTTTTAATTTTTTTGCTCTCTTCTATTATGTCATTATTCCGGTGTTAT
ATGTGTGACACAGTGCTCAAATAAAGCAAAATACTTTTAGGGAATTCGATTCGTAAATTA
TAAAAGCTGAAAGTTTAACAATGATTTGTTAGCATAAAATTATCTATGTTTACATCTTTT
AAGTGATGTTTAAAGAGCGTTGATTCTCTGCGGTTGTCATTACAAACTCTGATAGTTGCA
ATATGTTCATTGGTATATTTATGTATATATATTTGATTATAACTTCAACTTGTATGATGC
TTGTTGACATTTTGGTACTGTTTATTGGGAAGTAATGAAATGGTCTACAATCACCCTGGT
CCCTGGCCATGTTTATGTGTTATGGGGACATGATGTGTTTGTATTGCGACGGAATTTAAT
ATTTGTGTCATTTATGGTGTGTAATCCTGAATAGGAATGAATTTCAAAAGTTATGTGTAT
CCACTACTATATTATACATTGTACCCGGAATGTATTGGTGTTAAAAACCTTGTAAAATAG
TTGTTTTATGTTCAATATTTTATTTATGAACTAGGACTATAATTCTGTTTACGTTCTATA
ACAAACCATGTTGTTCATGTTAAG

InterProScan

PANTHER
V_ATPase_D (IPR002699) - T[1-165] 1.0E-61
Pfam
V_ATPase_D (IPR002699) - T[2-117] 6.1E-50
TIGRFAM
V_ATPase_D (IPR002699) - T[2-120] 3.8E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VATD_HUMAN 69.697 % 231 5.98E-78